ID A0A2Z2HKL4_9ARCH Unreviewed; 176 AA.
AC A0A2Z2HKL4;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=DNA-directed RNA polymerase subunit Rpo6 {ECO:0000256|HAMAP-Rule:MF_00192};
DE EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};
DE AltName: Full=DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192};
GN Name=rpoK {ECO:0000256|HAMAP-Rule:MF_00192,
GN ECO:0000313|EMBL:ARS64547.1};
GN Synonyms=rpo6 {ECO:0000256|HAMAP-Rule:MF_00192};
GN ORFNames=NMSP_0928 {ECO:0000313|EMBL:ARS64547.1};
OS Candidatus Nitrosomarinus catalina.
OC Archaea; Nitrososphaerota; Nitrososphaeria; Nitrosopumilales;
OC Nitrosopumilaceae; Nitrosomarinus.
OX NCBI_TaxID=1898749 {ECO:0000313|EMBL:ARS64547.1, ECO:0000313|Proteomes:UP000249949};
RN [1] {ECO:0000313|EMBL:ARS64547.1, ECO:0000313|Proteomes:UP000249949}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SPOT01 {ECO:0000313|EMBL:ARS64547.1,
RC ECO:0000313|Proteomes:UP000249949};
RX PubMed=28418097;
RA Ahlgren N.A., Chen Y., Needham D.M., Parada A.E., Sachdeva R., Trinh V.,
RA Chen T., Fuhrman J.A.;
RT "Genome and epigenome of a novel marine Thaumarchaeota strain suggest viral
RT infection, phosphorothioation DNA modification and multiple restriction
RT systems.";
RL Environ. Microbiol. 19:2434-2452(2017).
CC -!- FUNCTION: DNA-dependent RNA polymerase (RNAP) catalyzes the
CC transcription of DNA into RNA using the four ribonucleoside
CC triphosphates as substrates. {ECO:0000256|HAMAP-Rule:MF_00192}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|HAMAP-Rule:MF_00192};
CC -!- SUBUNIT: Part of the RNA polymerase complex. {ECO:0000256|HAMAP-
CC Rule:MF_00192}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00192}.
CC -!- SIMILARITY: Belongs to the archaeal Rpo6/eukaryotic RPB6 RNA polymerase
CC subunit family. {ECO:0000256|HAMAP-Rule:MF_00192}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP021324; ARS64547.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2Z2HKL4; -.
DR KEGG; nct:NMSP_0928; -.
DR OrthoDB; 10567at2157; -.
DR Proteomes; UP000249949; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:UniProtKB-UniRule.
DR Gene3D; 3.90.940.10; -; 1.
DR HAMAP; MF_00192; RNApol_arch_Rpo6; 1.
DR InterPro; IPR020708; DNA-dir_RNA_polK_14-18kDa_CS.
DR InterPro; IPR006110; Pol_omega/Rpo6/RPB6.
DR InterPro; IPR036161; RPB6/omega-like_sf.
DR InterPro; IPR006111; Rpo6/Rpb6.
DR PANTHER; PTHR47227; DNA-DIRECTED RNA POLYMERASE SUBUNIT K; 1.
DR PANTHER; PTHR47227:SF5; DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2; 1.
DR Pfam; PF01192; RNA_pol_Rpb6; 1.
DR SMART; SM01409; RNA_pol_Rpb6; 1.
DR SUPFAM; SSF63562; RPB6/omega subunit-like; 1.
DR PROSITE; PS01111; RNA_POL_K_14KD; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00192};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|HAMAP-Rule:MF_00192};
KW Nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00192,
KW ECO:0000313|EMBL:ARS64547.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW Rule:MF_00192};
KW Transferase {ECO:0000256|HAMAP-Rule:MF_00192, ECO:0000313|EMBL:ARS64547.1}.
SQ SEQUENCE 176 AA; 20184 MW; C31E0DF2C610B189 CRC64;
MIRLYNVLRE FLYLSSAEEP KVITPESETL ETEADPNLGL NKALDTYRKL IEKNTDNPTE
PLTDKEQSNL ENRIKEIEER EVVEKIEDHD PVEIPCEKGK ITIGPPTLTR FEQARIMGAR
ALQLSLGAPP FIEIPKNARI SLDISMEELE KKVIPITIRR VLPNGDYQNI PIDYFI
//
