ID A0A2Z6GE27_9PROT Unreviewed; 1040 AA.
AC A0A2Z6GE27;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE RecName: Full=type I site-specific deoxyribonuclease {ECO:0000256|ARBA:ARBA00012654};
DE EC=3.1.21.3 {ECO:0000256|ARBA:ARBA00012654};
GN ORFNames=OYT1_ch2356 {ECO:0000313|EMBL:BBE51871.1};
OS Ferriphaselus amnicola.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
OC Gallionellaceae; Ferriphaselus.
OX NCBI_TaxID=1188319 {ECO:0000313|EMBL:BBE51871.1, ECO:0000313|Proteomes:UP000033070};
RN [1] {ECO:0000313|EMBL:BBE51871.1, ECO:0000313|Proteomes:UP000033070}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OYT1 {ECO:0000313|EMBL:BBE51871.1,
RC ECO:0000313|Proteomes:UP000033070};
RA Kato S., Itoh T., Ohkuma M.;
RT "OYT1 Genome Sequencing.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endonucleolytic cleavage of DNA to give random double-stranded
CC fragments with terminal 5'-phosphates, ATP is simultaneously
CC hydrolyzed.; EC=3.1.21.3; Evidence={ECO:0000256|ARBA:ARBA00000851};
CC -!- SIMILARITY: Belongs to the HsdR family.
CC {ECO:0000256|ARBA:ARBA00008598}.
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DR EMBL; AP018738; BBE51871.1; -; Genomic_DNA.
DR RefSeq; WP_062626684.1; NZ_AP018738.1.
DR AlphaFoldDB; A0A2Z6GE27; -.
DR STRING; 1188319.OYT1_01507; -.
DR REBASE; 253825; FamOYT1ORF2360P.
DR KEGG; fam:OYT1_ch2356; -.
DR OrthoDB; 9758243at2; -.
DR Proteomes; UP000033070; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009035; F:type I site-specific deoxyribonuclease activity; IEA:UniProtKB-EC.
DR GO; GO:0009307; P:DNA restriction-modification system; IEA:UniProtKB-KW.
DR Gene3D; 3.90.1570.50; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR007409; Restrct_endonuc_type1_HsdR_N.
DR InterPro; IPR040980; SWI2_SNF2.
DR PANTHER; PTHR42927; HELICASE SUPERFAMILY 1 AND 2 DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR42927:SF1; HELICASE SUPERFAMILY 1 AND 2 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF04313; HSDR_N; 1.
DR Pfam; PF18766; SWI2_SNF2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000033070};
KW Restriction system {ECO:0000256|ARBA:ARBA00022747}.
FT DOMAIN 275..511
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|SMART:SM00487"
SQ SEQUENCE 1040 AA; 115720 MW; B2DE7BA7E2B2AB81 CRC64;
MTGLHKEIEF ENDICEHLAA HDWLYAEGDF TAYDRARAVF PADVIAWVQA TQPKAWESLS
KSHGAATETV LLDRIRKQLD DRGTLDVLRH GIELLGLRQP LQLAQFKPAL AMNSELQAKY
AANRLRVVRQ VRYSLFNENA IDLVLFLNGL PIATVELKSH FTQSVDDAVD QYRFDRHPKP
KGQAAAEPLL DFPRGALVHF AVSNSAAMMT TRLLGAATTF LPFNLGDHGA AGNPVNPNGH
RTAYLWEQVW ARESWLEIIG RYIVAKRDSK KQIKAIIFPR YHQLDATRKL VAAVISEGAG
QKYLIQHSAG SGKTNSIAWT AHFLADLHDA QHKKLFDSVL VVSDRTVLDT QLQEAIFDFE
RTAGVVATIK GESQSKSGEL AQALSGGKKI VVCTIQTFPF ALQAVRELAA TQGKRFAVIA
DEAHSSQTGT AASKLKQLLS AEEMQELADG GEVGTEDLLA MQMAARSNDA GITYVAFTAT
PKAKTLELFG RRPNPALPAS DENLPAPFHV YSMRQAIEEG FILDVLKNYT PYKLAFKLAN
EGHEWDEKEV ERSTAMKGIM RWVRLHPYNI SQKVQVVVEH FRDSVQPLLE GKAKAMVVVG
SRLEAVRWQI AIDKYIKSQG YKIGTLVAFS GEVNDQESHP DPLTETSKVL NTNLNGRDIR
EAFATDEYQI LLVANKFQTG FDQPLLCGMY VDKRLAGIQA VQTLSRLNRA YPGKDTTYIL
DFVNDPNEVL AAFKTYYETA ELDGVTDPNL VYDLRAKLDA EGHYDDNEVD RVVNVEMNPH
ASQAELSAAI EPVADRLLKR YRAALTNHQA AVANKDAKAE QEAQDEMNAL MLFKRNLGAF
QRVYAFLSQI FDYGNTAIEK RAIFFKRLLP LLEFGREREG VDLSKVTLTH HKLKDQGKRN
LALVNGEYPK LSPLSETGSG EVQQKEKVYL AEIITKVNEL FEGELTDDDK LIYVNHVLKG
KLLESEILVQ QANNNTKEQF ANSPDLSNAI LSAIMDALSA HSTLSKQALD SEKVRSGLKD
VLLGPAQLYE ALRAQQVVNG
//