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Database: UniProt
Entry: A0A2Z7BD40_9LAMI
LinkDB: A0A2Z7BD40_9LAMI
Original site: A0A2Z7BD40_9LAMI 
ID   A0A2Z7BD40_9LAMI        Unreviewed;       620 AA.
AC   A0A2Z7BD40;
DT   10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT   10-OCT-2018, sequence version 1.
DT   24-JAN-2024, entry version 20.
DE   SubName: Full=25S rRNA (Cytosine-C(5))-methyltransferase nop2-like {ECO:0000313|EMBL:KZV31329.1};
GN   ORFNames=F511_40798 {ECO:0000313|EMBL:KZV31329.1};
OS   Dorcoceras hygrometricum.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae;
OC   Loxocarpinae; Dorcoceras.
OX   NCBI_TaxID=472368 {ECO:0000313|EMBL:KZV31329.1, ECO:0000313|Proteomes:UP000250235};
RN   [1] {ECO:0000313|EMBL:KZV31329.1, ECO:0000313|Proteomes:UP000250235}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. XS01 {ECO:0000313|Proteomes:UP000250235};
RX   PubMed=25902549; DOI=10.1073/pnas.1505811112;
RA   Xiao L., Yang G., Zhang L., Yang X., Zhao S., Ji Z., Zhou Q., Hu M.,
RA   Wang Y., Chen M., Xu Y., Jin H., Xiao X., Hu G., Bao F., Hu Y., Wan P.,
RA   Li L., Deng X., Kuang T., Xiang C., Zhu J.K., Oliver M.J., He Y.;
RT   "The resurrection genome of Boea hygrometrica: A blueprint for survival of
RT   dehydration.";
RL   Proc. Natl. Acad. Sci. U.S.A. 112:5833-5837(2015).
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC       {ECO:0000256|ARBA:ARBA00004604}.
CC   -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC       superfamily. RsmB/NOP family. {ECO:0000256|ARBA:ARBA00007494,
CC       ECO:0000256|PROSITE-ProRule:PRU01023}.
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DR   EMBL; KV007516; KZV31329.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2Z7BD40; -.
DR   OrthoDB; 1268at2759; -.
DR   Proteomes; UP000250235; Unassembled WGS sequence.
DR   GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:InterPro.
DR   GO; GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
DR   GO; GO:0001510; P:RNA methylation; IEA:InterPro.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR   InterPro; IPR018314; Fmu/NOL1/Nop2p_CS.
DR   InterPro; IPR031341; Methyltr_RsmF_N.
DR   InterPro; IPR001678; MeTrfase_RsmB/NOP2.
DR   InterPro; IPR011023; Nop2p.
DR   InterPro; IPR023267; RCMT.
DR   InterPro; IPR023273; RCMT_NOP2.
DR   InterPro; IPR029063; SAM-dependent_MTases_sf.
DR   NCBIfam; TIGR00446; nop2p; 1.
DR   PANTHER; PTHR22807:SF30; 28S RRNA (CYTOSINE(4447)-C(5))-METHYLTRANSFERASE-RELATED; 1.
DR   PANTHER; PTHR22807; NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING; 1.
DR   Pfam; PF01189; Methyltr_RsmB-F; 1.
DR   Pfam; PF17125; Methyltr_RsmF_N; 1.
DR   PRINTS; PR02008; RCMTFAMILY.
DR   PRINTS; PR02012; RCMTNOP2.
DR   SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR   PROSITE; PS01153; NOL1_NOP2_SUN; 1.
DR   PROSITE; PS51686; SAM_MT_RSMB_NOP; 1.
PE   3: Inferred from homology;
KW   Methyltransferase {ECO:0000256|ARBA:ARBA00022603, ECO:0000256|PROSITE-
KW   ProRule:PRU01023}; Reference proteome {ECO:0000313|Proteomes:UP000250235};
KW   Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW   ProRule:PRU01023};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691,
KW   ECO:0000256|PROSITE-ProRule:PRU01023};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|PROSITE-
KW   ProRule:PRU01023}.
FT   DOMAIN          217..506
FT                   /note="SAM-dependent MTase RsmB/NOP-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51686"
FT   REGION          1..153
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          507..620
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..20
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        28..52
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        53..69
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        80..97
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        98..113
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        120..153
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        566..604
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        605..620
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   ACT_SITE        436
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT   BINDING         309..315
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT   BINDING         333
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT   BINDING         360
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT   BINDING         379
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
SQ   SEQUENCE   620 AA;  69770 MW;  BF8B746FD5BD5FF9 CRC64;
     MGAPKLNKKK KGETAPSHPP GKKLKVELPL AKQPRKEDFL SDSDGIGEEP ETHQEFGDEE
     QEVETDSDMS SQGDDPFADD ILQGSDEEED GSDEDSDSDA DIEKRARAID EEKAQEEEDA
     EAELQLNIKE EADEFRLPTE GELEEESHRP PDLSNLQRRI KEIVRVLSNF KSLRQEGATR
     KDYIDQLKMD LCSYYGYNDF LIEALIEMFP VVELMELIEA FEKPRPICLR TNTLKTRRRD
     LAGVLLNRGV NLDPLSKWSK VGLVVYDSQV PIGATPEYMA GYYMLQSASS FLPVMALAPQ
     EKEKVVDMAA APGGKTTYIA ALMKNSGIIY ANEMKESRLK SLTANLHRMG VTNTIVSNYD
     GREMPKVLGV SSVDRVLLDA PCSGTGVISK DESVKTSKSE LDIQNCVYLQ KQLILAAIDM
     VDAGSKSGGY IVYSTCSIMV AENEAVIDYA LKKRDVKLVP CGLDFGRPGF IRFRGHRFHT
     SLEKTRRFYP HVHNMDGFFV AKLKKMSNTK PTQQPSEPSG EVEEEPELND GNGVEGDVQP
     EPENEQKQKK KRKNSTEMNK KVINGSPKKS QEERKSANER EKKKHRSREE ISKTREEKRV
     ALREAKRKAK IKSRAAANRR
//
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