ID A0A315UXA3_GAMAF Unreviewed; 484 AA.
AC A0A315UXA3;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=IF rod domain-containing protein {ECO:0000259|PROSITE:PS51842};
GN ORFNames=CCH79_00020060 {ECO:0000313|EMBL:PWA15964.1};
OS Gambusia affinis (Western mosquitofish) (Heterandria affinis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Gambusia.
OX NCBI_TaxID=33528 {ECO:0000313|EMBL:PWA15964.1, ECO:0000313|Proteomes:UP000250572};
RN [1] {ECO:0000313|EMBL:PWA15964.1, ECO:0000313|Proteomes:UP000250572}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NE01/NJP1002.9 {ECO:0000313|EMBL:PWA15964.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:PWA15964.1};
RX PubMed=29703783;
RA Hoffberg S.L., Troendle N.J., Glenn T.C., Mahmud O., Louha S., Chalopin D.,
RA Bennetzen J.L., Mauricio R.;
RT "A High-Quality Reference Genome for the Invasive Mosquitofish Gambusia
RT affinis Using a Chicago Library.";
RL G3 (Bethesda) 8:1855-1861(2018).
CC -!- SIMILARITY: Belongs to the intermediate filament family.
CC {ECO:0000256|RuleBase:RU000685}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PWA15964.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; NHOQ01002563; PWA15964.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A315UXA3; -.
DR STRING; 33528.ENSGAFP00000015547; -.
DR Proteomes; UP000250572; Unassembled WGS sequence.
DR GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 1.20.5.500; Single helix bin; 1.
DR Gene3D; 1.20.5.1160; Vasodilator-stimulated phosphoprotein; 1.
DR InterPro; IPR018039; IF_conserved.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR006821; Intermed_filament_DNA-bd.
DR PANTHER; PTHR45652; GLIAL FIBRILLARY ACIDIC PROTEIN; 1.
DR PANTHER; PTHR45652:SF19; ZGC:154009; 1.
DR Pfam; PF00038; Filament; 1.
DR Pfam; PF04732; Filament_head; 1.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 2.
DR PROSITE; PS00226; IF_ROD_1; 1.
DR PROSITE; PS51842; IF_ROD_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Intermediate filament {ECO:0000256|ARBA:ARBA00022754,
KW ECO:0000256|RuleBase:RU000685};
KW Reference proteome {ECO:0000313|Proteomes:UP000250572}.
FT DOMAIN 104..406
FT /note="IF rod"
FT /evidence="ECO:0000259|PROSITE:PS51842"
FT COILED 108..257
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 290..384
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 484 AA; 54974 MW; 80AAC5DD52883E5F CRC64;
MASFSSSARC ASSYRRTFGH GAYASPSLNR SFLGPAAAGG AHVTSRVYEV TRGSAVPAYR
PLGAAGPLGA ARPSAGRYGG LGETLDFSLA DALNQEFLAT RTNEKAELQH LNDRFASYIE
KVRFLETQNQ ALVLEVQRLR DRETPRIADL YQDEMNELRR QLEVLTNHRA RLEVERDNLV
DDLDKEEVQQ KEEAENSLAA FRADVDAATL ARLDLERRIE TLQEEIAFLK RIHEEEIREL
QNQMQETQVQ VQMDMSKPDL TAALRDIRAQ YEGIAAKNIA EAEEWYKSKV SDLNQAVSKN
NQALQQARQE TLEFRHQIQA YTCEIDSLKG TNESLLRQMR DMEERHGREA SSFQDTVARL
EAEIATMKDE MARHLREYQD LLNVKMALDV EIATYRKLLE GEESRSEPAQ NLQDFQNRPT
LTTVSSRIAL PMQSFSTLSF RETNPEPPLR SAETHSKKTV LIKTIETRDG EVVSESTQHQ
HDVM
//
