ID A0A315V2D8_GAMAF Unreviewed; 490 AA.
AC A0A315V2D8;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 22-FEB-2023, entry version 15.
DE RecName: Full=IF rod domain-containing protein {ECO:0000259|PROSITE:PS51842};
GN ORFNames=CCH79_00008112 {ECO:0000313|EMBL:PWA17638.1};
OS Gambusia affinis (Western mosquitofish) (Heterandria affinis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Gambusia.
OX NCBI_TaxID=33528 {ECO:0000313|EMBL:PWA17638.1, ECO:0000313|Proteomes:UP000250572};
RN [1] {ECO:0000313|EMBL:PWA17638.1, ECO:0000313|Proteomes:UP000250572}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NE01/NJP1002.9 {ECO:0000313|EMBL:PWA17638.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:PWA17638.1};
RX PubMed=29703783;
RA Hoffberg S.L., Troendle N.J., Glenn T.C., Mahmud O., Louha S., Chalopin D.,
RA Bennetzen J.L., Mauricio R.;
RT "A High-Quality Reference Genome for the Invasive Mosquitofish Gambusia
RT affinis Using a Chicago Library.";
RL G3 (Bethesda) 8:1855-1861(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PWA17638.1}.
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DR EMBL; NHOQ01002357; PWA17638.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A315V2D8; -.
DR Proteomes; UP000250572; Unassembled WGS sequence.
DR GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR Gene3D; 1.20.5.1160; Vasodilator-stimulated phosphoprotein; 1.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR006821; Intermed_filament_DNA-bd.
DR PANTHER; PTHR45652; GLIAL FIBRILLARY ACIDIC PROTEIN; 1.
DR PANTHER; PTHR45652:SF9; GLIAL FIBRILLARY ACIDIC PROTEIN; 1.
DR Pfam; PF00038; Filament; 1.
DR Pfam; PF04732; Filament_head; 1.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 1.
DR PROSITE; PS51842; IF_ROD_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Intermediate filament {ECO:0000256|ARBA:ARBA00022754};
KW Reference proteome {ECO:0000313|Proteomes:UP000250572}.
FT DOMAIN 87..490
FT /note="IF rod"
FT /evidence="ECO:0000259|PROSITE:PS51842"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 403..424
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 105..172
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 407..424
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 490 AA; 55195 MW; 1EEA7E5B76277A48 CRC64;
MESQRVQSSY RKRFGPQGGS GARIGSLSSN RLSWHGTPRS ITLSSPISRL SLGSASTALL
LGSPGDRLDF SADSLMKAHY KEIRTNEKME MMGLNDRFAS YIEKVRLLEQ QNKMLVAELN
QLKVKEPSRL GDIYQDELRE LRRQVDGLTN GKARLEVERD NLAADLAMLK QRFPLTSVLL
CMKLYLSESG SVCVRQMDCG VLSVPVQVCP GICRPCRVDI VPVKNEEGLV IMFILDFQEL
VDPSLKKSGL RQRVTQGWLY SEFQLRNLKL LMCCGGQNRR LKMRLPELRS LRRPSLAKDQ
CEGVVVDYLQ PRSEEVPLKE FRIPSKESCM QSETEALIEQ DLDPPSPAAQ SFTKRRSLLT
ERLDPSISFT RGALPRSCSN ESVRSLRRAS SLDDIDGMKV EWSSRPGETR THSNLKPSAL
NSTSDSDLIR HRTIGRIPQV TLTFGSDRLR PPSPTEIEII APSKVKDRTQ NVTEKVTQVT
QFCTSAAYRF
//
