ID A0A315W8V6_GAMAF Unreviewed; 678 AA.
AC A0A315W8V6;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE RecName: Full=T-box domain-containing protein {ECO:0000259|PROSITE:PS50252};
GN ORFNames=CCH79_00002828 {ECO:0000313|EMBL:PWA31406.1};
OS Gambusia affinis (Western mosquitofish) (Heterandria affinis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Gambusia.
OX NCBI_TaxID=33528 {ECO:0000313|EMBL:PWA31406.1, ECO:0000313|Proteomes:UP000250572};
RN [1] {ECO:0000313|EMBL:PWA31406.1, ECO:0000313|Proteomes:UP000250572}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NE01/NJP1002.9 {ECO:0000313|EMBL:PWA31406.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:PWA31406.1};
RX PubMed=29703783;
RA Hoffberg S.L., Troendle N.J., Glenn T.C., Mahmud O., Louha S., Chalopin D.,
RA Bennetzen J.L., Mauricio R.;
RT "A High-Quality Reference Genome for the Invasive Mosquitofish Gambusia
RT affinis Using a Chicago Library.";
RL G3 (Bethesda) 8:1855-1861(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00201}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00201}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PWA31406.1}.
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DR EMBL; NHOQ01000293; PWA31406.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A315W8V6; -.
DR STRING; 33528.ENSGAFP00000011351; -.
DR OMA; NRALGYY; -.
DR Proteomes; UP000250572; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0009790; P:embryo development; IEA:UniProt.
DR GO; GO:0045893; P:positive regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 2.60.40.820; Transcription factor, T-box; 1.
DR InterPro; IPR008967; p53-like_TF_DNA-bd_sf.
DR InterPro; IPR032385; T-box_assoc.
DR InterPro; IPR046360; T-box_DNA-bd.
DR InterPro; IPR036960; T-box_sf.
DR InterPro; IPR001699; TF_T-box.
DR InterPro; IPR018186; TF_T-box_CS.
DR PANTHER; PTHR11267:SF88; T-BOX BRAIN PROTEIN 1; 1.
DR PANTHER; PTHR11267; T-BOX PROTEIN-RELATED; 1.
DR Pfam; PF00907; T-box; 1.
DR Pfam; PF16176; T-box_assoc; 1.
DR PRINTS; PR00937; TBOX.
DR SMART; SM00425; TBOX; 1.
DR SUPFAM; SSF49417; p53-like transcription factors; 1.
DR PROSITE; PS01283; TBOX_1; 1.
DR PROSITE; PS01264; TBOX_2; 1.
DR PROSITE; PS50252; TBOX_3; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00201};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00201}; Reference proteome {ECO:0000313|Proteomes:UP000250572};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 209..394
FT /note="T-box"
FT /evidence="ECO:0000259|PROSITE:PS50252"
FT REGION 25..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 583..625
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 25..70
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 607..625
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 678 AA; 73929 MW; 92AD4D091CC8141F CRC64;
MQVEHCISLT SEISKKFMNV GSGFASSNGS EELSLQDHPI ISASDNLERS SPLKKNSREM
TNQSEADNFP DSKDASGDVQ RGKLSPDLHG VSDIRHNFDG SAGERCIFSP SAQPPSVSAA
PTAMFPYPSQ HGPAHPAFSI GSPSRYMAHH PVITNGAYNS LLTNTSPQGY PTAGYPYAQQ
YGHTYQGGAF YQFSSAQAGL VPGKAQVYLC NRALWLKFHR HQTEMIITKQ GRRMFPFLSF
NISGLDPTAH YNIFVDVILA DPNHWRFQGG KWVPCGKADT NVIGNRVYMH PDSPNTGAHW
MRQEISFGKL KLTNNKGASN NTGQMVVLQS LHKYQPRLHV VEVNEDGTED TSQPGRVQTF
TFTETQFIAV TAYQNTDITQ LKIDHNPFAK GFRDNYDTVY TGCDIDRLTP SPGDSPRSQI
VPGARYAMPS SFLQDQFVST YAKSRFHPGV GTGPGTERSV PLGNSLLSPQ QSEEPTVATP
PQRWFVTPAN NRLDFAASAY DAADFAGNAA TLLSYAAAGV KALPLPTAGC SNRPLGYYAD
PSGWGGRTPP QYCGVNSKSS SVFSCWPTNS LGGRASTNYL SEEGDSIATE RSPIGVSEET
KPKDITSESS WIETPSSIKS IDSSDSGIFE QAKRRRISPS ATPVSETVSP LKSELLAPRE
CEKNCTKDIG YYSFYPHS
//