GenomeNet

Database: UniProt
Entry: A0A315W8V6_GAMAF
LinkDB: A0A315W8V6_GAMAF
Original site: A0A315W8V6_GAMAF 
ID   A0A315W8V6_GAMAF        Unreviewed;       678 AA.
AC   A0A315W8V6;
DT   10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT   10-OCT-2018, sequence version 1.
DT   24-JAN-2024, entry version 22.
DE   RecName: Full=T-box domain-containing protein {ECO:0000259|PROSITE:PS50252};
GN   ORFNames=CCH79_00002828 {ECO:0000313|EMBL:PWA31406.1};
OS   Gambusia affinis (Western mosquitofish) (Heterandria affinis).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC   Gambusia.
OX   NCBI_TaxID=33528 {ECO:0000313|EMBL:PWA31406.1, ECO:0000313|Proteomes:UP000250572};
RN   [1] {ECO:0000313|EMBL:PWA31406.1, ECO:0000313|Proteomes:UP000250572}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NE01/NJP1002.9 {ECO:0000313|EMBL:PWA31406.1};
RC   TISSUE=Muscle {ECO:0000313|EMBL:PWA31406.1};
RX   PubMed=29703783;
RA   Hoffberg S.L., Troendle N.J., Glenn T.C., Mahmud O., Louha S., Chalopin D.,
RA   Bennetzen J.L., Mauricio R.;
RT   "A High-Quality Reference Genome for the Invasive Mosquitofish Gambusia
RT   affinis Using a Chicago Library.";
RL   G3 (Bethesda) 8:1855-1861(2018).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|PROSITE-ProRule:PRU00201}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00201}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PWA31406.1}.
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DR   EMBL; NHOQ01000293; PWA31406.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A315W8V6; -.
DR   STRING; 33528.ENSGAFP00000011351; -.
DR   OMA; NRALGYY; -.
DR   Proteomes; UP000250572; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0009790; P:embryo development; IEA:UniProt.
DR   GO; GO:0045893; P:positive regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 2.60.40.820; Transcription factor, T-box; 1.
DR   InterPro; IPR008967; p53-like_TF_DNA-bd_sf.
DR   InterPro; IPR032385; T-box_assoc.
DR   InterPro; IPR046360; T-box_DNA-bd.
DR   InterPro; IPR036960; T-box_sf.
DR   InterPro; IPR001699; TF_T-box.
DR   InterPro; IPR018186; TF_T-box_CS.
DR   PANTHER; PTHR11267:SF88; T-BOX BRAIN PROTEIN 1; 1.
DR   PANTHER; PTHR11267; T-BOX PROTEIN-RELATED; 1.
DR   Pfam; PF00907; T-box; 1.
DR   Pfam; PF16176; T-box_assoc; 1.
DR   PRINTS; PR00937; TBOX.
DR   SMART; SM00425; TBOX; 1.
DR   SUPFAM; SSF49417; p53-like transcription factors; 1.
DR   PROSITE; PS01283; TBOX_1; 1.
DR   PROSITE; PS01264; TBOX_2; 1.
DR   PROSITE; PS50252; TBOX_3; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW   ProRule:PRU00201};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW   ProRule:PRU00201}; Reference proteome {ECO:0000313|Proteomes:UP000250572};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          209..394
FT                   /note="T-box"
FT                   /evidence="ECO:0000259|PROSITE:PS50252"
FT   REGION          25..91
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          583..625
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        25..70
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        607..625
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   678 AA;  73929 MW;  92AD4D091CC8141F CRC64;
     MQVEHCISLT SEISKKFMNV GSGFASSNGS EELSLQDHPI ISASDNLERS SPLKKNSREM
     TNQSEADNFP DSKDASGDVQ RGKLSPDLHG VSDIRHNFDG SAGERCIFSP SAQPPSVSAA
     PTAMFPYPSQ HGPAHPAFSI GSPSRYMAHH PVITNGAYNS LLTNTSPQGY PTAGYPYAQQ
     YGHTYQGGAF YQFSSAQAGL VPGKAQVYLC NRALWLKFHR HQTEMIITKQ GRRMFPFLSF
     NISGLDPTAH YNIFVDVILA DPNHWRFQGG KWVPCGKADT NVIGNRVYMH PDSPNTGAHW
     MRQEISFGKL KLTNNKGASN NTGQMVVLQS LHKYQPRLHV VEVNEDGTED TSQPGRVQTF
     TFTETQFIAV TAYQNTDITQ LKIDHNPFAK GFRDNYDTVY TGCDIDRLTP SPGDSPRSQI
     VPGARYAMPS SFLQDQFVST YAKSRFHPGV GTGPGTERSV PLGNSLLSPQ QSEEPTVATP
     PQRWFVTPAN NRLDFAASAY DAADFAGNAA TLLSYAAAGV KALPLPTAGC SNRPLGYYAD
     PSGWGGRTPP QYCGVNSKSS SVFSCWPTNS LGGRASTNYL SEEGDSIATE RSPIGVSEET
     KPKDITSESS WIETPSSIKS IDSSDSGIFE QAKRRRISPS ATPVSETVSP LKSELLAPRE
     CEKNCTKDIG YYSFYPHS
//
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