ID A0A316GAH9_9RHOB Unreviewed; 351 AA.
AC A0A316GAH9;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000256|HAMAP-Rule:MF_00093};
GN ORFNames=C8D95_102538 {ECO:0000313|EMBL:PWK57888.1};
OS Silicimonas algicola.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae.
OX NCBI_TaxID=1826607 {ECO:0000313|EMBL:PWK57888.1, ECO:0000313|Proteomes:UP000245390};
RN [1] {ECO:0000313|EMBL:PWK57888.1, ECO:0000313|Proteomes:UP000245390}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 103371 {ECO:0000313|EMBL:PWK57888.1,
RC ECO:0000313|Proteomes:UP000245390};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000256|ARBA:ARBA00002986, ECO:0000256|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000256|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000256|ARBA:ARBA00010835, ECO:0000256|HAMAP-
CC Rule:MF_00093}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PWK57888.1}.
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DR EMBL; QGGV01000002; PWK57888.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A316GAH9; -.
DR KEGG; salo:EF888_11515; -.
DR OrthoDB; 9806673at2; -.
DR Proteomes; UP000245390; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.160.20; -; 1.
DR Gene3D; 3.30.70.1660; -; 1.
DR Gene3D; 6.10.140.1950; -; 1.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR NCBIfam; TIGR00019; prfA; 1.
DR PANTHER; PTHR43804; LD18447P; 1.
DR PANTHER; PTHR43804:SF7; LD18447P; 1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; Release factor; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00093};
KW Methylation {ECO:0000256|ARBA:ARBA00022481, ECO:0000256|HAMAP-
KW Rule:MF_00093}; Protein biosynthesis {ECO:0000256|HAMAP-Rule:MF_00093};
KW Reference proteome {ECO:0000313|Proteomes:UP000245390}.
FT DOMAIN 222..238
FT /note="Prokaryotic-type class I peptide chain release
FT factors"
FT /evidence="ECO:0000259|PROSITE:PS00745"
FT MOD_RES 229
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00093"
SQ SEQUENCE 351 AA; 38441 MW; BF9D2676A3856F3D CRC64;
MVPLDTLDQI RQRFQYLEAK MSGGAAPDQI ATLAKEYSDL KPVVAEIEGY RAMLTHRDEA
EAMLSDPELR GLAEDELQSL KEAIVKAESK LRLALLPKDA ADARPAIVEI RPGTGGDEAA
LFAGDLLRMY QRYAEARGWK FSVIELSETE LGGVKEAVVN IAGDNVFARL KFESGVHRVQ
RVPETESGGR IHTSAATVAV LPEAEEVDID IPATDIRIDT MRASGAGGQH VNTTDSAVRI
THLPTGIMVT SSEKSQHQNR AIAMAHLRAK LFDMKRQAAD DERAAARKSQ VGSGDRSERI
RTYNFPQGRM TDHRIGLTLY RLNEILGGDL DEVIDSLTEA DQAERLAEAG L
//
