ID A0A316TZ30_9BACT Unreviewed; 586 AA.
AC A0A316TZ30;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=HTH luxR-type domain-containing protein {ECO:0000259|SMART:SM00421};
GN ORFNames=DDZ15_00420 {ECO:0000313|EMBL:PWN08134.1};
OS Rhodohalobacter mucosus.
OC Bacteria; Balneolota; Balneolia; Balneolales; Balneolaceae;
OC Rhodohalobacter.
OX NCBI_TaxID=2079485 {ECO:0000313|EMBL:PWN08134.1, ECO:0000313|Proteomes:UP000245533};
RN [1] {ECO:0000313|EMBL:PWN08134.1, ECO:0000313|Proteomes:UP000245533}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8A47 {ECO:0000313|EMBL:PWN08134.1,
RC ECO:0000313|Proteomes:UP000245533};
RA Liu Z.-W.;
RT "Rhodohalobacter halophilus gen. nov., sp. nov., a moderately halophilic
RT member of the family Balneolaceae.";
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the Rap family. {ECO:0000256|ARBA:ARBA00038253}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PWN08134.1}.
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DR EMBL; QGGB01000001; PWN08134.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A316TZ30; -.
DR OrthoDB; 9810596at2; -.
DR Proteomes; UP000245533; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR46630; TETRATRICOPEPTIDE REPEAT PROTEIN 29; 1.
DR PANTHER; PTHR46630:SF1; TETRATRICOPEPTIDE REPEAT PROTEIN 29; 1.
DR Pfam; PF17874; TPR_MalT; 1.
DR SMART; SM00421; HTH_LUXR; 1.
DR SMART; SM00028; TPR; 6.
DR SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50005; TPR; 4.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000245533};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 387..407
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 118..151
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 158..191
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 198..231
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 238..271
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 516..573
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|SMART:SM00421"
FT COILED 352..379
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 404..469
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 586 AA; 66588 MW; B410EE99281B68FC CRC64;
MHNSVITIIT ILFIVWQVQE AEVSTREALQ AAASDSLLIH SLIDSSYENA FSNPDRALMF
ADSALRLSKE NSYKKGIAGA HGELGYAYSV KGDFRKAIDH LNHGIAISRA IGDSLGWVSK
INDLGSIYKS RNEYESAIEL YFEALRLCRE LDLQRGVAVT LGNIGLSYFE MDRNDRALEY
YTQALELNET LGDESSLAKT YNNIGLLHGD EGRYKQAQNY HEKALKLRKE LGYTIEIANS
LNNIGRLLMQ QGENVRAIDS LHTAMQINQD SDPELSSIIH ENLARSYESA GMLDSALVHA
RKTRTLSEEY GTMLGVQVGY ELMAGIYGKM GRFEEAYESQ RSMTSIKDSI LNIEMSRQIN
ELQTKYETAQ KEKEIALLEE ERQREAMLRN VFLSGLILVA IIGLLIYNRQ KLKIEKNRTE
LENKKLKEDQ LSKDLAHKKR ELTNQSLHLV QKNEMMKELK ETIKEIRLKS EVNGRELQSL
ENIVDYSFNL DDDWEQFRHY FKAVHSGFFD SLKSACPDLT PNELRLAALA KLRLSVKETA
TILGITPASV KTARYRLRKK LGLNTKDSLS GFLADFEKKN LKSSIR
//
