ID A0A316YVW2_9BASI Unreviewed; 307 AA.
AC A0A316YVW2;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 28-JUN-2023, entry version 13.
DE SubName: Full=Insert subdomain of RNA polymerase alpha subunit {ECO:0000313|EMBL:PWN92798.1};
DE Flags: Fragment;
GN ORFNames=FA10DRAFT_216250 {ECO:0000313|EMBL:PWN92798.1};
OS Acaromyces ingoldii.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina;
OC Exobasidiomycetes; Exobasidiales; Cryptobasidiaceae; Acaromyces.
OX NCBI_TaxID=215250 {ECO:0000313|EMBL:PWN92798.1, ECO:0000313|Proteomes:UP000245768};
RN [1] {ECO:0000313|EMBL:PWN92798.1, ECO:0000313|Proteomes:UP000245768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MCA 4198 {ECO:0000313|EMBL:PWN92798.1,
RC ECO:0000313|Proteomes:UP000245768};
RX PubMed=29771364; DOI=10.1093/molbev/msy072;
RA Kijpornyongpan T., Mondo S.J., Barry K., Sandor L., Lee J., Lipzen A.,
RA Pangilinan J., LaButti K., Hainaut M., Henrissat B., Grigoriev I.V.,
RA Spatafora J.W., Aime M.C.;
RT "Broad genomic sampling reveals a smut pathogenic ancestry of the fungal
RT clade Ustilaginomycotina.";
RL Mol. Biol. Evol. 0:0-0(2018).
CC -!- SIMILARITY: Belongs to the archaeal Rpo3/eukaryotic RPB3 RNA polymerase
CC subunit family. {ECO:0000256|ARBA:ARBA00025804}.
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DR EMBL; KZ819634; PWN92798.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A316YVW2; -.
DR STRING; 215250.A0A316YVW2; -.
DR InParanoid; A0A316YVW2; -.
DR OrthoDB; 5472982at2759; -.
DR Proteomes; UP000245768; Unassembled WGS sequence.
DR GO; GO:0055029; C:nuclear DNA-directed RNA polymerase complex; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd07031; RNAP_II_RPB3; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR HAMAP; MF_00320; RNApol_arch_Rpo3; 1.
DR InterPro; IPR001514; DNA-dir_RNA_pol_30-40kDasu_CS.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR022842; RNAP_Rpo3/Rpb3/RPAC1.
DR InterPro; IPR036643; RNApol_insert_sf.
DR PANTHER; PTHR11800; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR11800:SF2; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
DR PROSITE; PS00446; RNA_POL_D_30KD; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Reference proteome {ECO:0000313|Proteomes:UP000245768};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 14..280
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:PWN92798.1"
FT NON_TER 307
FT /evidence="ECO:0000313|EMBL:PWN92798.1"
SQ SEQUENCE 307 AA; 33777 MW; 313277DED014ABC5 CRC64;
SQPKITLRAL TRERANFVLE GVDLSFANSL RRAMIADIPT CAIDMVEIQS NTTPLPDEML
AHRLGMVPLI SADTSRVLVD HRECSCEEGC DRCSVELTLH AKCEERGIMQ VTSKHLIRSN
SLGSPYGDDE AMNAMGPMPS AQKSLDFGKP IGFDDPSVDG VMLVKMRKGQ ELKIRCIARK
GFAKEHAKWS PVSAIGFEYD PYNALRHTAY WYELDAKAEW PLSDNAREEE APPEGAPFDY
NRKADRFYFD VETVGSMSPV EVVETGLHIL ELRTAQVVQE LGVLLEGPVD GDAGGAMPNG
NGLDYGG
//
