ID A0A317C6R3_9GAMM Unreviewed; 554 AA.
AC A0A317C6R3;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=DKT75_20080 {ECO:0000313|EMBL:PWQ93901.1};
OS Leucothrix arctica.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC Thiotrichaceae; Leucothrix.
OX NCBI_TaxID=1481894 {ECO:0000313|EMBL:PWQ93901.1, ECO:0000313|Proteomes:UP000245506};
RN [1] {ECO:0000313|EMBL:PWQ93901.1, ECO:0000313|Proteomes:UP000245506}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IMCC9719 {ECO:0000313|EMBL:PWQ93901.1,
RC ECO:0000313|Proteomes:UP000245506};
RA Choi A., Baek K.;
RT "Leucothrix arctica sp. nov., isolated from Arctic seawater.";
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PWQ93901.1}.
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DR EMBL; QGKL01000042; PWQ93901.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A317C6R3; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000245506; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR CDD; cd05689; S1_RPS1_repeat_ec4; 1.
DR CDD; cd05691; S1_RPS1_repeat_ec6; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000245506};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:PWQ93901.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 21..87
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 105..171
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 192..260
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 277..347
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 364..434
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 451..520
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 554 AA; 61329 MW; 62E7AB3CA0916826 CRC64;
MSESFAELFE ESLTFIEMTP GSLVNATVVE VTPDFVTVSA GLKSEGVIPA EQFKNEAGEI
TVVKGDVVEV ALESVEDGFG ETKLSREKAR RLRAWEVLEE ALENDEIITG IISGKVKGGF
TVELGDIRAF LPGSLVDVRP VRDTTYLEGK ELEFKLIKLD QRRNNVVVSR RAVVEEEYSA
ERDALLETLA EGKVVKGIVK NLTDYGAFID LGGIDGLLHI TDMAWKRVKH PSEIIQMGDE
VDVKILKFDK EKSRVSLGLK QLGEDPWQDL VRRYPVNTRL FGKVSNLTDY GCFVEIEDGV
EGLVHVSEMD WTNKNVNPSK VVTLGDEVEV MILDIDAERR RISLGMKQCK ANPWDEFAKS
FNKNDIVKGN IKSITDFGIF IGLDGGIDGL VHLSDISWNV QGEEAVRDYK KGDEVEAIVL
AVDPERERIS LGIKQMDQDP FSAYLAANPK GTIVKGTITE VTPKMAKVDL GDGIEGSLRA
SELSRDRVED ASTILKVGEA VEAKFMGVDR KTRMMNLSIK AKDFADEAEV MKEYSNRSSS
GTSLGDIFKE QMGE
//
