ID   A0A317C8P8_9GAMM        Unreviewed;       788 AA.
AC   A0A317C8P8;
DT   10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT   10-OCT-2018, sequence version 1.
DT   24-JAN-2024, entry version 15.
DE   SubName: Full=RNA-binding transcriptional accessory protein {ECO:0000313|EMBL:PWQ94926.1};
GN   ORFNames=DKW60_16105 {ECO:0000313|EMBL:PWQ94926.1};
OS   Leucothrix pacifica.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC   Thiotrichaceae; Leucothrix.
OX   NCBI_TaxID=1247513 {ECO:0000313|EMBL:PWQ94926.1, ECO:0000313|Proteomes:UP000245539};
RN   [1] {ECO:0000313|EMBL:PWQ94926.1, ECO:0000313|Proteomes:UP000245539}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JCM 18388 {ECO:0000313|EMBL:PWQ94926.1,
RC   ECO:0000313|Proteomes:UP000245539};
RA   Choi A., Baek K.;
RT   "Leucothrix arctica sp. nov., isolated from Arctic seawater.";
RL   Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PWQ94926.1}.
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DR   EMBL; QGKM01000052; PWQ94926.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A317C8P8; -.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000245539; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000245539}.
FT   DOMAIN          652..721
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   REGION          727..788
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        731..776
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   788 AA;  86701 MW;  6E63658292760D1B CRC64;
     MIAIAERIAN ELNVNTQQVT AAVALLDEGA TVPFISRYRK EVTGGLDDGQ MRLLLERLGY
     LRELESRRDA IIKLIDEQDK LTPALKKDIL EADSKTRLED LYLPFKQKRR TKGQIAIEAG
     IEPLAEALLQ DPSLDPEVEA AKYINDSADF KQAFEATKGV LDGAKYILME RFAEDADLLA
     DIRQYMGDQG ELKSTVVPGK EQEAAKFSDY FDNTDQLKKM PSHRVLAMLR GRNEGFLQLK
     VDAPDDGSDT HPCEFKIAKR NGIQSQGRKA DDWLNEVVRW TWKIKLQLKM ETELLAEIRQ
     AAEVEAIHVF GQNLKDLLLA APAGQKATMG LDPGLRTGVK VAVIDSTGKY LDSMAIFPHQ
     PRNQWDESIA LLAKMAAKHN VNLLAIGNGT ASRETDRLCA ELIKKHPDLG LQKIMVSEAG
     ASVYSASEIA AAEFPELDVT IRGAISIARR LQDPLAELVK IDPKSIGVGQ YQHDVNQTQL
     AKNLDSVVED CVNSVGVEAN TASAAVLSHV AGLNKTIAHN IVAYRDENGA FTNRKQLKKV
     PRLGEKAFEQ AAGFIRIRNS DNPLDASAVH PESYSVVQRM LADTQCDIKQ LLGNKQNLSK
     LQAEKYIDEK FGLPTVTDII SELDKPGRDP RPEFKAAVFK EGVEKVSDLK PGMILEGTVS
     NVTHFGAFVD IGVHQDGLVH ISAMSDKFIK DPHEVVKAGE IVKVKVMEVD LERKRIALSL
     RLDDPLESEA MTSKKSGQNK PNQNKSSRTH SNKPKRQGSG QSSQGSGSNN APVNNAFAEA
     FANAKKGK
//