ID A0A317ZHS4_9BACT Unreviewed; 1288 AA.
AC A0A317ZHS4;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=ATP-dependent RNA helicase HrpA {ECO:0000313|EMBL:PXA03857.1};
GN Name=hrpA {ECO:0000313|EMBL:PXA03857.1};
GN ORFNames=DDZ13_09450 {ECO:0000313|EMBL:PXA03857.1};
OS Coraliomargarita sinensis.
OC Bacteria; Verrucomicrobiota; Opitutae; Puniceicoccales;
OC Coraliomargaritaceae; Coraliomargarita.
OX NCBI_TaxID=2174842 {ECO:0000313|EMBL:PXA03857.1, ECO:0000313|Proteomes:UP000247099};
RN [1] {ECO:0000313|EMBL:PXA03857.1, ECO:0000313|Proteomes:UP000247099}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WN38 {ECO:0000313|EMBL:PXA03857.1,
RC ECO:0000313|Proteomes:UP000247099};
RA Zhou L.Y.;
RT "Coraliomargarita sinensis sp. nov., isolated from a marine solar
RT saltern.";
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PXA03857.1}.
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DR EMBL; QHJQ01000006; PXA03857.1; -; Genomic_DNA.
DR InParanoid; A0A317ZHS4; -.
DR Proteomes; UP000247099; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR024590; HrpA_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR010222; RNA_helicase_HrpA.
DR NCBIfam; TIGR01967; DEAH_box_HrpA; 1.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF83; PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF11898; DUF3418; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:PXA03857.1};
KW Hydrolase {ECO:0000313|EMBL:PXA03857.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000247099}.
FT DOMAIN 27..190
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 222..386
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 1288 AA; 146407 MW; 7B8F6521D916B3F3 CRC64;
MREIVKSVPK PSYSGELPIH QRREEILQTL QSNQIVVIAG ETGSGKTTQI PKFLLECGFG
SKGWIGCTQP RRVAALSVAQ RIAEELNVRY GHEVGAKIRF TDETRKDSLI KVMTDGILLN
ELQDDPMLTN YEAIVIDEAH ERSLNIDFIL GCLRNLAEKR KDLKIIITSA TIDTERFSEA
FNNAPVIEVS GRMYPVDTLY RPVEDLAQGN KDYDYIDAAA EVIDEILSDN SEGDILVFLP
GERDIRELRK ALEDSPARLC DLLPLYGRLA KGDQQRIFHP GGRRRVILST NIAETSLTVP
GIRYVVDTGL ARISRYSPHS RTQRLPIEPI AQSSAEQRKG RCGRVSDGTC YRLYSAEDYG
AREAFNTPEI HRSNLASVIL RMMAFKLGDI RTFPFIEPPG ESAIVGGYRL LSELGAVTRD
EKSPNEDDYR LTKLGRRLSR LPVDPTVGRM LLQAQEEGAL DEVLVIASGL SIQDPRERPA
EVAKEADEIH KQFVHPESDF LTLLNIWNSY HEKLDALSHS KLRKFCRAHF LSYQRMREWR
DTHHQIERML DERRTSKNKR RTTNAVENSQ TCMDAQYAAI HRSILAGLLS NIAYKEEEHN
YRGPRNRKAL LFPGSGLFDH KTAKKQRKAA YAKKTRPKPA KTTAPKWIVC GEWMETNRLY
ARNAARIEVD WIGAMAGDLL SVRHTEPYWS TKSAAVLCKQ RKLLFGLEIS RSNVSYCRIA
PDEATDIFTR NGLVEGGIQE RPAFFTHNEA LRETAASEIA RQQLGSTQLI EDQLFEFYRT
RLSGVGSYSD LRRFAKAEHG GSLDFLKAQL RDLLPRNSEV AEEDFPRTIQ LGGHLMPLSY
RNEPGHEADG VTLRIPVSQL DAIQEGVLDW AIPGHLEAKI ENLLRNLPKP LRIKLHPLKE
RVKELREKIR PSDTALSEQL TDLLKRDYGI QTYRDQWTSE MPEHLKLRIQ VENREGEPLA
ESRDLETLRK KLDRKSKSVR SNDGLESIPA WQRAAEKFER ENLNEWNFGD LPERIDLSGE
SGLPLAAYPA LVLESGKVHL RLLTERAASV KATREAWPDL CELVLGRELA WIRRDLKELK
GLGVGLLPLG GYEAIKDSSW QHLRRHLFAC DSLLPLKESA FKKTLERADR EKRGIVQKLN
EQLAAVLEAR ADVALILEKK KTKQAISYPG MRTQLQRIAP ADVLDQFEFS DLPHITRFLK
GMIIRAQRAR ESIQRDMEKA KRVAPFEAKF ESLSKLASQY KEPEAVKGYM ILLEEFKISV
FAQELGTAQK TSEKRLDDLA SQIEALLR
//
