ID   A0A318K4G2_9NOCA        Unreviewed;       379 AA.
AC   A0A318K4G2;
DT   10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT   10-OCT-2018, sequence version 1.
DT   27-MAR-2024, entry version 24.
DE   SubName: Full=RNA polymerase ECF family sigma subunit {ECO:0000313|EMBL:PXX66974.1};
GN   ORFNames=DFR70_103730 {ECO:0000313|EMBL:PXX66974.1};
OS   Nocardia tenerifensis.
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae;
OC   Nocardia.
OX   NCBI_TaxID=228006 {ECO:0000313|EMBL:PXX66974.1, ECO:0000313|Proteomes:UP000247569};
RN   [1] {ECO:0000313|EMBL:PXX66974.1, ECO:0000313|Proteomes:UP000247569}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 44704 {ECO:0000313|EMBL:PXX66974.1,
RC   ECO:0000313|Proteomes:UP000247569};
RA   Goeker M.;
RT   "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT   most valuable type-strain genomes for metagenomic binning, comparative
RT   biology and taxonomic classification.";
RL   Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBUNIT: Interacts transiently with the RNA polymerase catalytic core
CC       formed by RpoA, RpoB, RpoC and RpoZ (2 alpha, 1 beta, 1 beta' and 1
CC       omega subunit) to form the RNA polymerase holoenzyme that can initiate
CC       transcription. {ECO:0000256|ARBA:ARBA00011344}.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|ARBA:ARBA00010641}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PXX66974.1}.
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DR   EMBL; QJKF01000003; PXX66974.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A318K4G2; -.
DR   Proteomes; UP000247569; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   GO; GO:0009628; P:response to abiotic stimulus; IEA:UniProt.
DR   Gene3D; 1.10.1740.10; -; 1.
DR   Gene3D; 3.10.450.50; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR032710; NTF2-like_dom_sf.
DR   InterPro; IPR039425; RNA_pol_sigma-70-like.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014305; RNA_pol_sigma-G_actinobac.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   NCBIfam; TIGR02960; SigX5; 1.
DR   PANTHER; PTHR43133:SF46; ECF RNA POLYMERASE SIGMA FACTOR SIGG; 1.
DR   PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF54427; NTF2-like; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          66..128
FT                   /note="RNA polymerase sigma-70 region 2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          185..236
FT                   /note="RNA polymerase sigma factor 70 region 4 type 2"
FT                   /evidence="ECO:0000259|Pfam:PF08281"
SQ   SEQUENCE   379 AA;  41593 MW;  4C74F3A66D6EE8AB CRC64;
     METNSGCGTH RSPRPPVTGG TPSLILIAQV ASFRVWDVSV ACGRVTPMND LPGQSAGLAP
     DVLESFEKHR RELCAYAYRM LGSSFEAEDA VQETFTRAWK SYDSFEGRAS LRSWLYRITT
     NVCLDMLDGP QRRARPMDLS GPSRPDSPLP APQPDYVWIE PIPNGLAFGA DPAEHATAKD
     TLRLAFVAAC QHLPATQRAI LIMREVLRFS ANETAEALTM SPASVNSALQ RARATMSKVQ
     PAATDTYDES NEDQRKLVDN FVKAFEAYDM DTLTTLLKSD VALSMPPLDF WVSGPENVAA
     FMLGHGSGCR DSRMIRLEGA NGEPAFGQYK PSGEPGVWVP WSVIVLELDG NAVSNMCFFL
     DTEKLFPLFG LPPEVREPV
//