ID A0A318TL50_9BRAD Unreviewed; 612 AA.
AC A0A318TL50;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=DNA ligase (ATP) {ECO:0000256|ARBA:ARBA00012727};
DE EC=6.5.1.1 {ECO:0000256|ARBA:ARBA00012727};
GN ORFNames=BJ122_103215 {ECO:0000313|EMBL:PYF04560.1};
OS Rhodopseudomonas faecalis.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Rhodopseudomonas.
OX NCBI_TaxID=99655 {ECO:0000313|EMBL:PYF04560.1, ECO:0000313|Proteomes:UP000248148};
RN [1] {ECO:0000313|EMBL:PYF04560.1, ECO:0000313|Proteomes:UP000248148}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 11668 {ECO:0000313|EMBL:PYF04560.1,
RC ECO:0000313|Proteomes:UP000248148};
RA Goeker M.;
RT "Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II
RT (KMG-II): from individual species to whole genera.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho-
CC (deoxyribonucleotide)m = (deoxyribonucleotide)n+m + AMP +
CC diphosphate.; EC=6.5.1.1; Evidence={ECO:0000256|ARBA:ARBA00034003};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PYF04560.1}.
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DR EMBL; QJTI01000003; PYF04560.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A318TL50; -.
DR OrthoDB; 9767858at2; -.
DR Proteomes; UP000248148; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR CDD; cd07897; Adenylation_DNA_ligase_Bac1; 1.
DR CDD; cd07972; OBF_DNA_ligase_Arch_LigB; 1.
DR Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR026333; ATP_dep_DNA_lig_pp_1105_fam.
DR InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR InterPro; IPR016059; DNA_ligase_ATP-dep_CS.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR NCBIfam; TIGR04120; DNA_lig_bact; 1.
DR PANTHER; PTHR45674; DNA LIGASE 1/3 FAMILY MEMBER; 1.
DR PANTHER; PTHR45674:SF13; DNA LIGASE-RELATED; 1.
DR Pfam; PF04679; DNA_ligase_A_C; 1.
DR Pfam; PF01068; DNA_ligase_A_M; 1.
DR SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS00697; DNA_LIGASE_A1; 1.
DR PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE 4: Predicted;
KW Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000313|EMBL:PYF04560.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000248148}.
FT DOMAIN 366..503
FT /note="ATP-dependent DNA ligase family profile"
FT /evidence="ECO:0000259|PROSITE:PS50160"
FT REGION 96..138
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 122..138
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 612 AA; 68134 MW; 4B8D1362B6C58E16 CRC64;
MNRFAHLLDR LGYEPGRNAK LRLITDYLRS TADPERGYAL AALTGALSFK HAKPALIRDL
IAQRADPVLF ALSYDYVGDL SETVALMWSR EAAISPPPCG EGSGVRDRNG SSTSGHPHPS
PPRKGEGARR AWGDGHDDQA REAAGVVAED RAAKLRNDHT PSLTEVVTTL ATLGKAELPA
QLMRWLDELD ETGRWALLKL VTGALRIGIS ARLAKTAAAA LGDQDPHDIE LVWPGLTPPY
LELFAWLEGR GDKPDNSDPA PFRPVMLAHA IEDADFAALD ARDYIAEWKW DGIRVQAVSG
QDPDGAMVAR LYSRSGEDIS KSFPDLLPAL RRPGAIDGEL LIVRDGRVQP FNVLQQRLNR
KSVTPKLIQE FPIHLRAYDL LADGDQDLRT LPFAARRARL ESFVAALDDP QIDLSATIDF
ADWPALTAAR HDPASAGAGL DADAVEGVML KRRDALYLPG RPKGQWWKWK HDPHVIDAVL
MYAQRGHGKR SSYYSDYTFG LWTLVDGAEV LVPVGKAYFG FTDEELLQID RFVRRNTTER
FGPVRHVVHE PEHGLVLEVA FEGLQRSSRH KSGVAMRFPR ISRLRWDKPP RDADRLATLE
RLLDRPRLVR DR
//
