ID A0A329R2Z4_9ACTN Unreviewed; 806 AA.
AC A0A329R2Z4;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE SubName: Full=RNA-binding transcriptional accessory protein {ECO:0000313|EMBL:RAW18911.1};
GN ORFNames=DPM12_02395 {ECO:0000313|EMBL:RAW18911.1};
OS Phytoactinopolyspora halophila.
OC Bacteria; Actinomycetota; Actinomycetes; Jiangellales; Jiangellaceae;
OC Phytoactinopolyspora.
OX NCBI_TaxID=1981511 {ECO:0000313|EMBL:RAW18911.1, ECO:0000313|Proteomes:UP000250462};
RN [1] {ECO:0000313|EMBL:RAW18911.1, ECO:0000313|Proteomes:UP000250462}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YIM 96934 {ECO:0000313|EMBL:RAW18911.1,
RC ECO:0000313|Proteomes:UP000250462};
RA Tang S.-K.;
RT "Phytoactinopolyspora halophila sp. nov., a novel halophilic actinomycete
RT isolated from a saline soil in China.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RAW18911.1}.
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DR EMBL; QMIG01000001; RAW18911.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A329R2Z4; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000250462; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000250462}.
FT DOMAIN 685..754
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 760..806
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 11..27
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 806 AA; 87720 MW; 6C1B2F306A903281 CRC64;
MGRRVRNERS VGDVTTSTST QATANDDAGV TTRPWVYQTI ATELGIDEHQ VRAAVALLDS
GATVPFIARY RKEATGTLDD AQLRALEERL RYLRELDERR DTILESIREQ GKLTDELHAQ
IMGAETKARL EDIYLPYKPK RRTKAQIARE AGLEPLADML LGDPDHDPDT AAASFINDTV
PDTSAALNGA RSILVERFAE DADLIGELRE RMWSRGRLVS QLREGAEQAK ADHTKYADYF
DFSEPLATAR SHRVLALLRG EKEEILDVTV DPFRADEEPP SGPTDYETTI ASRFGIEDRG
RPADRWLADT VRWAWRTRIL VNLGFDLRTR ARQAAEEEAI RVFAGNLRDL LLAAPAGPRP
TLGLDPAYRT GVKVAVVDGT GKVATTATIY PHKPQARWND ALDALEKLVR DHAVELIAIG
NGTASRETDR LAIELIKRCN DRRLSKLVVS EAGASVYSAS SFATRELPDL DVSLRGAVSI
ARRLQDPLAE LVKIDPKSIG VGQYQHDLSE VALSRSLDAV VEDCVNAVGV DLNTASTPLL
ARVSGIGTGL ATNIVTHRES HGPFRSRDQL RDVPRLGPKA FEQSAGFLRI SGGDEPLDAS
SVHPESYPLA RKIARAAGGD VKSILGDGNA LRRLKPADFA DDSFGLPTVT DVLAELEKPG
RDPRPSFTTA SFAEGVETIA DVKRGMRLEG VVTNVAAFGA FVDIGVHQDG LVHISAMSHE
FVENPRDVVK PGDVVTVKVL DVDTERHRIS LTLRLDDDVT ASASGKQQSR APGRKDKPGR
SGPAEGTGAP RGAIADAFRR AGYNGS
//