ID A0A329RZY3_9STRA Unreviewed; 537 AA.
AC A0A329RZY3;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE RecName: Full=dihydrolipoyllysine-residue succinyltransferase {ECO:0000256|ARBA:ARBA00012945};
DE EC=2.3.1.61 {ECO:0000256|ARBA:ARBA00012945};
DE AltName: Full=2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|ARBA:ARBA00032406};
GN ORFNames=JG687_00012163 {ECO:0000313|EMBL:KAG6953848.1}, PC110_g14462
GN {ECO:0000313|EMBL:RAW29166.1}, PC113_g2142
GN {ECO:0000313|EMBL:KAG2867247.1}, PC115_g13320
GN {ECO:0000313|EMBL:KAG2909251.1}, PC117_g2328
GN {ECO:0000313|EMBL:KAG2953021.1}, PC118_g11499
GN {ECO:0000313|EMBL:KAG2979929.1}, PC129_g12215
GN {ECO:0000313|EMBL:KAG3216932.1};
OS Phytophthora cactorum.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=29920 {ECO:0000313|EMBL:RAW29166.1, ECO:0000313|Proteomes:UP000251314};
RN [1] {ECO:0000313|EMBL:RAW29166.1, ECO:0000313|Proteomes:UP000251314}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10300 {ECO:0000313|EMBL:RAW29166.1,
RC ECO:0000313|Proteomes:UP000251314};
RA Armitage A.D., Lysoe E., Nellist C.F., Harrison R.J., Brurberg M.B.;
RT "Draft genome of the strawberry crown rot pathogen Phytophthora cactorum.";
RL Submitted (JAN-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAG2867247.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=15-7 {ECO:0000313|EMBL:KAG2867247.1}, 4032
RC {ECO:0000313|EMBL:KAG2909251.1}, 4040 {ECO:0000313|EMBL:KAG2953021.1},
RC P415 {ECO:0000313|EMBL:KAG2979929.1}, and P421
RC {ECO:0000313|EMBL:KAG3216932.1};
RA Armitage A.D., Nellist C.F., Bates H., Vickerstaff R.J., Harrison R.J.;
RT "Effector identification in a new, highly contiguous assembly of the
RT strawberry crown rot pathogen Phytophthora cactorum.";
RL Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAG6953848.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NZFS 3830 {ECO:0000313|EMBL:KAG6953848.1};
RA Mcdougal R., Panda P., Williams N., Studholme D.J.;
RT "Phytophthora aleatoria, a newly-described species from Pinus radiata is
RT distinct from Phytophthora cactorum isolates based on comparative
RT genomics.";
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=(R)-lipoate; Xref=ChEBI:CHEBI:83088;
CC Evidence={ECO:0000256|ARBA:ARBA00001938};
CC -!- PATHWAY: Amino-acid degradation; L-lysine degradation via saccharopine
CC pathway; glutaryl-CoA from L-lysine: step 6/6.
CC {ECO:0000256|ARBA:ARBA00005145}.
CC -!- SIMILARITY: Belongs to the 2-oxoacid dehydrogenase family.
CC {ECO:0000256|ARBA:ARBA00007317}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RAW29166.1}.
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DR EMBL; RCMG01000028; KAG2867247.1; -; Genomic_DNA.
DR EMBL; RCMI01000472; KAG2909251.1; -; Genomic_DNA.
DR EMBL; RCMK01000030; KAG2953021.1; -; Genomic_DNA.
DR EMBL; RCML01000349; KAG2979929.1; -; Genomic_DNA.
DR EMBL; RCMV01000453; KAG3216932.1; -; Genomic_DNA.
DR EMBL; JAENGZ010000794; KAG6953848.1; -; Genomic_DNA.
DR EMBL; MJFZ01000444; RAW29166.1; -; Genomic_DNA.
DR STRING; 29920.A0A329RZY3; -.
DR UniPathway; UPA00868; UER00840.
DR Proteomes; UP000251314; Unassembled WGS sequence.
DR Proteomes; UP000688947; Unassembled WGS sequence.
DR Proteomes; UP000697107; Unassembled WGS sequence.
DR Proteomes; UP000735874; Unassembled WGS sequence.
DR Proteomes; UP000736787; Unassembled WGS sequence.
DR Proteomes; UP000760860; Unassembled WGS sequence.
DR Proteomes; UP000774804; Unassembled WGS sequence.
DR GO; GO:0045252; C:oxoglutarate dehydrogenase complex; IEA:InterPro.
DR GO; GO:0004149; F:dihydrolipoyllysine-residue succinyltransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0033512; P:L-lysine catabolic process to acetyl-CoA via saccharopine; IEA:UniProtKB-UniPathway.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-KW.
DR CDD; cd06849; lipoyl_domain; 2.
DR Gene3D; 2.40.50.100; -; 2.
DR Gene3D; 3.30.559.10; Chloramphenicol acetyltransferase-like domain; 1.
DR InterPro; IPR003016; 2-oxoA_DH_lipoyl-BS.
DR InterPro; IPR001078; 2-oxoacid_DH_actylTfrase.
DR InterPro; IPR000089; Biotin_lipoyl.
DR InterPro; IPR023213; CAT-like_dom_sf.
DR InterPro; IPR011053; Single_hybrid_motif.
DR InterPro; IPR006255; SucB.
DR NCBIfam; TIGR01347; sucB; 1.
DR PANTHER; PTHR43416:SF5; DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL; 1.
DR PANTHER; PTHR43416; DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED; 1.
DR Pfam; PF00198; 2-oxoacid_dh; 1.
DR Pfam; PF00364; Biotin_lipoyl; 2.
DR SUPFAM; SSF52777; CoA-dependent acyltransferases; 1.
DR SUPFAM; SSF51230; Single hybrid motif; 2.
DR PROSITE; PS50968; BIOTINYL_LIPOYL; 2.
DR PROSITE; PS00189; LIPOYL; 2.
PE 3: Inferred from homology;
KW Acyltransferase {ECO:0000256|ARBA:ARBA00023315};
KW Lipoyl {ECO:0000256|ARBA:ARBA00022823};
KW Reference proteome {ECO:0000313|Proteomes:UP000251314};
KW Transferase {ECO:0000313|EMBL:RAW29166.1};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946};
KW Tricarboxylic acid cycle {ECO:0000256|ARBA:ARBA00022532}.
FT DOMAIN 75..150
FT /note="Lipoyl-binding"
FT /evidence="ECO:0000259|PROSITE:PS50968"
FT DOMAIN 178..253
FT /note="Lipoyl-binding"
FT /evidence="ECO:0000259|PROSITE:PS50968"
FT REGION 160..188
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 260..325
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 265..279
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 303..322
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 537 AA; 55952 MW; C01E98961075A531 CRC64;
MHGSRRVLLR AAARANGAAR RSVTSLSSSA GVLAARSSNS GALKLRGVCA VPARAQRLNA
ASAVQLRAFS STGEATDVPV PSMGDSISEG TVVEWLKQPG DAVAEDEVVV VLETDKVSVD
VRAPYAGAMG QQLAAIDDNV LVGAPLFQIV KGAAGAESAP ETKTEAAPAA AAAPSGEETT
VPVPSMGDSI SEGTVVEWIK KAGDYVAEDE VVVVLETDKV SVDVRAPKAG TITSTLADVD
QTVEIGVPLF SMVLGGEAPA AASTPAPAAP TPSPASTPAP AASTPVASPE PVAGANPLLA
TPERASRREK MSRMRLRTAE RLKESQNTAA SLTTFQEVDM SKLMGLRKQY KDAFEAKHGV
KLGFMSAFVK ASASALLEVP GVNAMIDDEH QEIVYRDYVD MSVAVSTPKG LVTPVLKNTE
SMSFADVEKG LAELAARARD GKLTLEEMTG GNFTISNGGV FGSLMGTPII NLPQSGILGM
HGTKMRPVVV DGEVVARPMM YLALTYDHRL IDGREGVTCL KAIADKIENP ERLLLDI
//