ID A0A329T4Q3_9STRA Unreviewed; 436 AA.
AC A0A329T4Q3;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=Chromo domain-containing protein {ECO:0000259|PROSITE:PS50013};
GN ORFNames=JG687_00000144 {ECO:0000313|EMBL:KAG6974812.1}, PC110_g763
GN {ECO:0000313|EMBL:RAW43106.1}, PC113_g2447
GN {ECO:0000313|EMBL:KAG2866934.1}, PC115_g1880
GN {ECO:0000313|EMBL:KAG2941619.1}, PC117_g1893
GN {ECO:0000313|EMBL:KAG2953608.1}, PC118_g1248
GN {ECO:0000313|EMBL:KAG2998505.1}, PC129_g663
GN {ECO:0000313|EMBL:KAG3228854.1};
OS Phytophthora cactorum.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=29920 {ECO:0000313|EMBL:RAW43106.1, ECO:0000313|Proteomes:UP000251314};
RN [1] {ECO:0000313|EMBL:RAW43106.1, ECO:0000313|Proteomes:UP000251314}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10300 {ECO:0000313|EMBL:RAW43106.1,
RC ECO:0000313|Proteomes:UP000251314};
RA Armitage A.D., Lysoe E., Nellist C.F., Harrison R.J., Brurberg M.B.;
RT "Draft genome of the strawberry crown rot pathogen Phytophthora cactorum.";
RL Submitted (JAN-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAG2866934.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=15-7 {ECO:0000313|EMBL:KAG2866934.1}, 4032
RC {ECO:0000313|EMBL:KAG2941619.1}, 4040 {ECO:0000313|EMBL:KAG2953608.1},
RC P415 {ECO:0000313|EMBL:KAG2998505.1}, and P421
RC {ECO:0000313|EMBL:KAG3228854.1};
RA Armitage A.D., Nellist C.F., Bates H., Vickerstaff R.J., Harrison R.J.;
RT "Effector identification in a new, highly contiguous assembly of the
RT strawberry crown rot pathogen Phytophthora cactorum.";
RL Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAG6974812.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NZFS 3830 {ECO:0000313|EMBL:KAG6974812.1};
RA Mcdougal R., Panda P., Williams N., Studholme D.J.;
RT "Phytophthora aleatoria, a newly-described species from Pinus radiata is
RT distinct from Phytophthora cactorum isolates based on comparative
RT genomics.";
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RAW43106.1}.
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DR EMBL; RCMG01000033; KAG2866934.1; -; Genomic_DNA.
DR EMBL; RCMI01000025; KAG2941619.1; -; Genomic_DNA.
DR EMBL; RCMK01000023; KAG2953608.1; -; Genomic_DNA.
DR EMBL; RCML01000015; KAG2998505.1; -; Genomic_DNA.
DR EMBL; RCMV01000009; KAG3228854.1; -; Genomic_DNA.
DR EMBL; JAENGZ010000003; KAG6974812.1; -; Genomic_DNA.
DR EMBL; MJFZ01000008; RAW43106.1; -; Genomic_DNA.
DR STRING; 29920.A0A329T4Q3; -.
DR Proteomes; UP000251314; Unassembled WGS sequence.
DR Proteomes; UP000688947; Unassembled WGS sequence.
DR Proteomes; UP000697107; Unassembled WGS sequence.
DR Proteomes; UP000735874; Unassembled WGS sequence.
DR Proteomes; UP000736787; Unassembled WGS sequence.
DR Proteomes; UP000760860; Unassembled WGS sequence.
DR Proteomes; UP000774804; Unassembled WGS sequence.
DR GO; GO:0043229; C:intracellular organelle; IEA:UniProt.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd00024; CD_CSD; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR Pfam; PF00385; Chromo; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000251314};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 265..284
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 296..313
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 348..371
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 383..401
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 413..430
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 3..64
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT REGION 53..175
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 224..249
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..78
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 79..94
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 95..110
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 111..163
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 233..249
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 436 AA; 48649 MW; B32897C6D619C0C2 CRC64;
MPDDIERIVD RKLIKQRVHY YVVWKGFGQE NNTWESRIDL MADGYSDIIK RFEDQRKKES
GSSTPRGRSP GRSTSRSKSP GRSRGRRSRS RSSSVSRSRS RSASVSRKLS VNNNDEEKKE
KKHKESPSKT PTTPQRRRSP RYKENNNETN VKETPRRRST RKQATPETSS TQFVSRLDEL
DDSVLLRSTI AALAPQVREM TPPAPLTAET EVHKKPVTLS YEEEEDSVLL KSQTTKKAES
SATVHHEHAS STPNGLIAKA VESGYLASFL SVAAVVGSLV ASQMLPRDAD EETDLWRRWL
SFLTPVVALL LFFHQKDARA SAKWVATGLA WRAAAELLLL ISDTPREFEM MVAISVALAN
VSLLIAVVSI LRNGEHDQSK STLALLSVGV LTLFLSDSWV ISTENSELES RVILMSMAVL
TIALSPMPTV SSEDDD
//
