GenomeNet

Database: UniProt
Entry: A0A340WSZ4_LIPVE
LinkDB: A0A340WSZ4_LIPVE
Original site: A0A340WSZ4_LIPVE 
ID   A0A340WSZ4_LIPVE        Unreviewed;      1028 AA.
AC   A0A340WSZ4;
DT   10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT   10-OCT-2018, sequence version 1.
DT   24-JAN-2024, entry version 26.
DE   SubName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X2 {ECO:0000313|RefSeq:XP_007450085.1};
GN   Name=SMARCAD1 {ECO:0000313|RefSeq:XP_007450085.1};
OS   Lipotes vexillifer (Yangtze river dolphin).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti;
OC   Lipotidae; Lipotes.
OX   NCBI_TaxID=118797 {ECO:0000313|Proteomes:UP000265300, ECO:0000313|RefSeq:XP_007450085.1};
RN   [1] {ECO:0000313|RefSeq:XP_007450085.1}
RP   IDENTIFICATION.
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Chromosome {ECO:0000256|ARBA:ARBA00004286}.
CC   -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family.
CC       {ECO:0000256|ARBA:ARBA00007025}.
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DR   RefSeq; XP_007450085.1; XM_007450023.1.
DR   AlphaFoldDB; A0A340WSZ4; -.
DR   STRING; 118797.A0A340WSZ4; -.
DR   GeneID; 103078625; -.
DR   CTD; 56916; -.
DR   InParanoid; A0A340WSZ4; -.
DR   OrthoDB; 5482994at2759; -.
DR   Proteomes; UP000265300; Unplaced.
DR   GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR   GO; GO:0043130; F:ubiquitin binding; IEA:InterPro.
DR   GO; GO:0006974; P:DNA damage response; IEA:UniProtKB-KW.
DR   CDD; cd17998; DEXHc_SMARCAD1; 1.
DR   CDD; cd18793; SF2_C_SNF; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR   InterPro; IPR003892; CUE.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR038718; SNF2-like_sf.
DR   InterPro; IPR000330; SNF2_N.
DR   PANTHER; PTHR10799; SNF2/RAD54 HELICASE FAMILY; 1.
DR   PANTHER; PTHR10799:SF964; SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A CONTAINING DEAD/H BOX 1; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF00176; SNF2-rel_dom; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51140; CUE; 2.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   3: Inferred from homology;
KW   Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW   Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   Reference proteome {ECO:0000313|Proteomes:UP000265300}.
FT   DOMAIN          158..200
FT                   /note="CUE"
FT                   /evidence="ECO:0000259|PROSITE:PS51140"
FT   DOMAIN          253..296
FT                   /note="CUE"
FT                   /evidence="ECO:0000259|PROSITE:PS51140"
FT   DOMAIN          511..679
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          860..1012
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          15..82
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          124..144
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          203..253
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          303..328
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        44..72
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        204..218
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        225..241
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        303..326
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1028 AA;  117406 MW;  151248471CB4CDCF CRC64;
     MNLFNLDRFR FEKRNKIEEA PEATPQPSLP GPSSPISLSA EEENAEGEVS RAGTPDSDIT
     EKTEDSSVPE TPENERKASI SYFKNQRGIQ YIDLSSDSED VVSPDCSSTV QEKKFSKDTV
     IIVSEPSEDE ESQGLPTMAG RNNNDISELE DLSELEDLKD AKLQTLKELF PQRSDSDLLK
     LIESTSTMDG AIAAALLMFG DAEGGGPRKR KLSSSSEPFE EDEFNDDQSM KKKRLDQGEE
     SNESAESSSN WEKQESIVLK LQKEFPNFDK EELREVLKEH EWMYTEALES LKVFAEDQDM
     QYASPSEFPN GKEVSSRSQN YPKNAAKTKL KQKCSMKPQN GFNKKRKKTV FNPKRVIEDS
     EYDSGSDVGS SLDEDYSSGE EVMEDGYKGK ILHFLQDASI GELTLIPQCS QKKAQKITEL
     RPFNSWEALF TKMSKTNGLS EDLIWNCKTL IQERDVVIRL MNKCEDISNK LTKQVTMLTG
     NGGGWNIEQP SILNQSLSLK PYQKVGLNWL ALVHKHGLNG ILADEMGLGK TIQAIAFLAY
     LYQEGNKGPH LIVVPASTID NWLREVNLWC PTLKVLCYYG SQEERKQIRY NIHSRYEEYN
     VIVTTYNCAI SSSDDRSLFR RLKLNYAIFD EGHMLKNMGS IRYQHLMTIN ANNRLLLTGT
     PVQNNLLELM SLLNFVMPHM FSSSTSEIRR MFSSKTKSAD EQSIYEKERI AHAKQIIKPF
     ILRRVKEEVL KQLPPKKDRI ELCAMSEKQE QLYLGLFNRL KKSINNMEKN TEMCNVMMQL
     RKMANHPLLH RQYYTAEKLK EMSQLMLKEP THCEANPDLI FEDMEVMTDF ELHVLCKQYR
     HINNFQLDMD LILDSGKFRV LGCILSELKQ KGDRVVLFSQ FTMMLDILEV LLKHHQHRYL
     RLDGKTQISE RIHLIDEFNT DMDIFVFLLS TKAGGLGINL TSANVVILHD IDCNPYNDKQ
     AEDRCHRVGQ TKEVLVIKLI GQGTIEESML KINQQKLKLE QDMTTVDEGD EGSMPADIAT
     LLKTSMGL
//
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