GenomeNet

Database: UniProt
Entry: A0A340XZG1_LIPVE
LinkDB: A0A340XZG1_LIPVE
Original site: A0A340XZG1_LIPVE 
ID   A0A340XZG1_LIPVE        Unreviewed;       683 AA.
AC   A0A340XZG1;
DT   10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT   10-OCT-2018, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   SubName: Full=Methyl-CpG-binding domain protein 1 isoform X2 {ECO:0000313|RefSeq:XP_007465637.1};
GN   Name=MBD1 {ECO:0000313|RefSeq:XP_007465637.1};
OS   Lipotes vexillifer (Yangtze river dolphin).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti;
OC   Lipotidae; Lipotes.
OX   NCBI_TaxID=118797 {ECO:0000313|Proteomes:UP000265300, ECO:0000313|RefSeq:XP_007465637.1};
RN   [1] {ECO:0000313|RefSeq:XP_007465637.1}
RP   IDENTIFICATION.
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   RefSeq; XP_007465637.1; XM_007465575.1.
DR   AlphaFoldDB; A0A340XZG1; -.
DR   GeneID; 103086301; -.
DR   CTD; 4152; -.
DR   OrthoDB; 5262043at2759; -.
DR   Proteomes; UP000265300; Unplaced.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   CDD; cd01396; MeCP2_MBD; 1.
DR   InterPro; IPR016177; DNA-bd_dom_sf.
DR   InterPro; IPR001739; Methyl_CpG_DNA-bd.
DR   InterPro; IPR002857; Znf_CXXC.
DR   PANTHER; PTHR12396; METHYL-CPG BINDING PROTEIN, MBD; 1.
DR   PANTHER; PTHR12396:SF46; METHYL-CPG-BINDING DOMAIN PROTEIN 1; 1.
DR   Pfam; PF01429; MBD; 1.
DR   Pfam; PF02008; zf-CXXC; 3.
DR   SMART; SM00391; MBD; 1.
DR   SUPFAM; SSF54171; DNA-binding domain; 1.
DR   PROSITE; PS50982; MBD; 1.
DR   PROSITE; PS51058; ZF_CXXC; 3.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000265300};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00509}.
FT   DOMAIN          1..69
FT                   /note="MBD"
FT                   /evidence="ECO:0000259|PROSITE:PS50982"
FT   DOMAIN          169..216
FT                   /note="CXXC-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51058"
FT   DOMAIN          217..263
FT                   /note="CXXC-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51058"
FT   DOMAIN          357..405
FT                   /note="CXXC-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51058"
FT   REGION          80..123
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          274..334
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          417..478
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          553..600
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          625..666
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        80..94
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        101..120
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        294..308
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        310..334
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        567..587
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   683 AA;  75561 MW;  6D8C57BC869674E9 CRC64;
     MAEDWLDCPA LGPGWKRREV FRKSGATCGR SDTYYQSPTG DRIRSKVELT RYLGPACDLT
     LFDFKQGILC YPAPKAHSLA IPSRKRKKPS KPAKAQKRQV GPSKSEVRKE APRDETKADA
     DTVPASLPAP GCCENCGISF SGDGTRRQRL KTLCKDCRAQ RIAFNREQRM FKRVGCGECA
     ACQVTEDCGA CSTCLLQLPH DVASGLFCKC ERRRCLRIVE RSRGCGVCRG CQTREDCGRC
     RVCLRPPRPG LRRQWRCVQR RCLRHLAHRL RRRHHQRCQR RPPLAVAPPA GKHGRRRGGC
     DSKVAPRRRP PRTQPLPALP PSQPPESPEL HPRALAPSPP AEFIYYCVDE DELQPYTNRR
     QNRKCGACAA CLRRMDCGHC DFCCDKPKFG GSNQKRQKCR WRQCLQFAMK RLLPSVWAGS
     EDGTRPPTPY PRRKRPGSAR RPRLGQTPKP PLATPMAQPD RAQTPVKQEA GSGFVLPPPG
     TDLVFLREGA SSPVQVPGPA PASTTALLQE AQCPGLSWVV ALPQVKQEKA DAQEDWTPGT
     AILTSPVLLP GCPSKAVDPG LPPVKQEPPD PEEDKEEANK DDPTADLAPE EEAGGAGTPV
     ITEIFSLGGT RLRDTAVWLP SLQGRQSGRE DGCKEWETEE TLAPTSTSCK PRGWPGTHVS
     LSPPPTSMMW VSCRRSWCPS SQT
//
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