ID A0A341ZK22_WHEAT Unreviewed; 492 AA.
AC A0A341ZK22;
DT 10-OCT-2018, integrated into UniProtKB/TrEMBL.
DT 10-OCT-2018, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE RecName: Full=PAS domain-containing protein {ECO:0000259|PROSITE:PS50112};
GN ORFNames=CFC21_061409 {ECO:0000313|EMBL:KAF7053496.1}, CFC21_061410
GN {ECO:0000313|EMBL:KAF7053503.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS4D02G143700.1};
RN [1] {ECO:0000313|EMBL:KAF7053496.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7053496.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS4D02G143700.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS4D02G143700.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS4D02G143700.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7053496.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7053496.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM022222; KAF7053496.1; -; Genomic_DNA.
DR EMBL; CM022222; KAF7053503.1; -; Genomic_DNA.
DR EnsemblPlants; TraesCS4D02G143700.1; TraesCS4D02G143700.1; TraesCS4D02G143700.
DR EnsemblPlants; TraesCSU02G156700.1; TraesCSU02G156700.1; TraesCSU02G156700.
DR Gramene; TraesCS4D02G143700.1; TraesCS4D02G143700.1; TraesCS4D02G143700.
DR Gramene; TraesCS4D03G0293000.1; TraesCS4D03G0293000.1.CDS; TraesCS4D03G0293000.
DR Gramene; TraesCSU02G156700.1; TraesCSU02G156700.1; TraesCSU02G156700.
DR Gramene; TraesCSU03G0167400.1; TraesCSU03G0167400.1.CDS; TraesCSU03G0167400.
DR Gramene; TraesRN4D0100303300.1; TraesRN4D0100303300.1; TraesRN4D0100303300.
DR Gramene; TraesWEE_scaffold_066435_01G000100.1; TraesWEE_scaffold_066435_01G000100.1; TraesWEE_scaffold_066435_01G000100.
DR Proteomes; UP000019116; Chromosome 4D.
DR Proteomes; UP000019116; Chromosome Un.
DR Proteomes; UP000815260; Chromosome 4D.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR Pfam; PF00989; PAS; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606}.
FT DOMAIN 84..155
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT REGION 23..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 215..238
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 262..335
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 357..377
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..51
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 217..238
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 262..279
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 280..294
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 313..335
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 492 AA; 54230 MW; 41E80D89BA1EEA54 CRC64;
MEPDELLRKI RVLEEGQEEL KREIGKLIPG QGHSSASPPP PPPPPPRRPF PALQQATSSR
GRALALLHQS SSSSSSRPQR PGLSDRHCHR ILQSLGQAVH VISLEGKVLY WNRFAEHLYG
YCSSEAIGQD LLELICDPCD FSPAHEIIRN IFMGKCWRGK FPVKHKSGER FSVVVNNTPL
YDEDGSLVGL TCLSGDARIL EEIVGPSVVG KSYPNSAKPH LQVNNKPKSG LPQKCLSDSQ
EPLQSAITSK ITNLATKVTS RVRSRIRSGQ SCDEQDGNGR QGQYSDHDAR EELTSSEAST
PGGDVLHGTF VTEEKSPVNS RKTNSDDSGQ GKGGFQKIFS SKAEALLTKK GISWPWKGNE
NDGGCGKNNM TSPPLHDKQE NTQIRQGVPV LEPIIIPDSK DTEYAQAGKY EVSGSWWTFN
NNSTSSTMSS TVSSNSSPIE RVDYEADCLD YEILWEDLTL GEQVLAEQCI MLCGMDRMWQ
LKYSPGRNIQ KK
//
