ID A0A348B3L9_9CREN Unreviewed; 354 AA.
AC A0A348B3L9;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=DNA polymerase IV {ECO:0000313|EMBL:BBD72771.1};
DE EC=2.7.7.7 {ECO:0000313|EMBL:BBD72771.1};
GN ORFNames=GCM10007116_16320 {ECO:0000313|EMBL:GGT99675.1},
GN HS1genome_1160 {ECO:0000313|EMBL:BBD72771.1};
OS Sulfodiicoccus acidiphilus.
OC Archaea; Thermoproteota; Thermoprotei; Sulfolobales; Sulfolobaceae;
OC Sulfodiicoccus.
OX NCBI_TaxID=1670455 {ECO:0000313|EMBL:BBD72771.1, ECO:0000313|Proteomes:UP000276741};
RN [1] {ECO:0000313|Proteomes:UP000276741}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HS-1 {ECO:0000313|Proteomes:UP000276741};
RA Sakai H.D., Kurosawa N.;
RT "Complete genome sequence of Sulfodiicoccus acidiphilus strain HS-1.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:BBD72771.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=HS-1 {ECO:0000313|EMBL:BBD72771.1};
RX PubMed=31331368;
RA Sakai H.D., Kurosawa N.;
RT "Complete genome sequence of the Sulfodiicoccus acidiphilus strain HS-1T,
RT the first crenarchaeon that lacks polB3, isolated from an acidic hot spring
RT in Ohwaku-dani, Hakone, Japan.";
RL BMC Res. Notes 12:444-444(2019).
RN [3] {ECO:0000313|EMBL:GGT99675.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=JCM 31740 {ECO:0000313|EMBL:GGT99675.1};
RX PubMed=30832757;
RA Wu L., Ma J.;
RT "The Global Catalogue of Microorganisms (GCM) 10K type strain sequencing
RT project: providing services to taxonomists for standard genome sequencing
RT and annotation.";
RL Int. J. Syst. Evol. Microbiol. 69:895-898(2019).
RN [4] {ECO:0000313|EMBL:GGT99675.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=JCM 31740 {ECO:0000313|EMBL:GGT99675.1};
RA Sun Q., Ohkuma M.;
RL Submitted (SEP-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AP018553; BBD72771.1; -; Genomic_DNA.
DR EMBL; BMQS01000015; GGT99675.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A348B3L9; -.
DR KEGG; sacd:HS1genome_1160; -.
DR OrthoDB; 372207at2157; -.
DR Proteomes; UP000276741; Chromosome.
DR Proteomes; UP000616143; Unassembled WGS sequence.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR CDD; cd03586; PolY_Pol_IV_kappa; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.40.1170.60; -; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.30.1490.100; DNA polymerase, Y-family, little finger domain; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR036775; DNA_pol_Y-fam_lit_finger_sf.
DR InterPro; IPR017961; DNA_pol_Y-fam_little_finger.
DR InterPro; IPR022880; DNApol_IV.
DR InterPro; IPR024728; PolY_HhH_motif.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001126; UmuC.
DR PANTHER; PTHR11076:SF33; DNA POLYMERASE KAPPA; 1.
DR PANTHER; PTHR11076; DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; 1.
DR Pfam; PF00817; IMS; 1.
DR Pfam; PF11799; IMS_C; 1.
DR Pfam; PF11798; IMS_HHH; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF100879; Lesion bypass DNA polymerase (Y-family), little finger domain; 1.
DR PROSITE; PS50173; UMUC; 1.
PE 4: Predicted;
KW Nucleotidyltransferase {ECO:0000313|EMBL:BBD72771.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000276741};
KW Transferase {ECO:0000313|EMBL:BBD72771.1}.
FT DOMAIN 3..187
FT /note="UmuC"
FT /evidence="ECO:0000259|PROSITE:PS50173"
SQ SEQUENCE 354 AA; 39577 MW; 462C193CD36C9262 CRC64;
MIVAFVDIDY FFAQVEEILN PSLRGKPVVV CVYSGRSLDS GAVATANYVA RKLGVKAGMP
IVKAKEVAPQ AIYLPMRREL YEEVSRRVMS ILRRVSARVE VASVDEAYID LTEVVEDFNE
GVKVGRELKE VIKTETELSV TVGLSINKVF AKVAAESVKP GGFKAVGPNE VERLIEELDV
KDIPGVGPVI AERLQKLGVR KLTDVRSAVR FVLSKAIGRA KTEYLLALAE NRYFPPVEEK
VRKTSGRYLT LTSNTRDFDE IVTVLRRSVE EAYRKTEGLP TRVAVVAIME DLDVVSRERS
LEHGLTQDSA FEIAKELLKE VLRDDQRKLR RVGVRLGKFV KPGGLDKFLN LQRD
//
