ID   A0A363RXD1_9GAMM        Unreviewed;       866 AA.
AC   A0A363RXD1;
DT   07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT   07-NOV-2018, sequence version 1.
DT   24-JAN-2024, entry version 20.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411};
GN   Name=lptD {ECO:0000256|HAMAP-Rule:MF_01411};
GN   ORFNames=DCO49_13875 {ECO:0000313|EMBL:PWB23431.1};
OS   Stenotrophomonas sp. SPM.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Stenotrophomonas.
OX   NCBI_TaxID=2170735 {ECO:0000313|EMBL:PWB23431.1, ECO:0000313|Proteomes:UP000250746};
RN   [1] {ECO:0000313|Proteomes:UP000250746}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SPM {ECO:0000313|Proteomes:UP000250746};
RA   Frantz D.C., Newman J.D.;
RL   Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000256|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|HAMAP-Rule:MF_01411}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PWB23431.1}.
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DR   EMBL; QETL01000068; PWB23431.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A363RXD1; -.
DR   Proteomes; UP000250746; Unassembled WGS sequence.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   PANTHER; PTHR30189; LPS-ASSEMBLY PROTEIN; 1.
DR   PANTHER; PTHR30189:SF1; LPS-ASSEMBLY PROTEIN LPTD; 1.
DR   Pfam; PF04453; LptD; 1.
DR   SUPFAM; SSF56935; Porins; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane {ECO:0000256|ARBA:ARBA00023237, ECO:0000256|HAMAP-
KW   Rule:MF_01411}; Membrane {ECO:0000256|HAMAP-Rule:MF_01411};
KW   Signal {ECO:0000256|HAMAP-Rule:MF_01411}.
FT   DOMAIN          335..763
FT                   /note="LptD C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF04453"
FT   REGION          78..100
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          533..554
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   866 AA;  97786 MW;  92CB3BC3282461A6 CRC64;
     MNPNRQRTAT FIAPMQRMGQ STVRFRPNPN RVRRALRLLP LPLSIAVCLP AMADDKPLNW
     GLCPATEVIP AFTDAPTPVP VPGQDKAAAS AEREQQPTDI EGDQLLGTTT VPQYQGNVAL
     RRGDQFVGTD KLSFDTESGN YIADGNVRYQ DASIRMVAKR AEGNQESDTH KITDIQYQLV
     SRRGNGDAES VDLQGAVGQM HRSTYTTCDP SQPVWKLSAP EIEVDNDEGF GTARNAVLRI
     GKVPVLWAPY FKFPIDDRRK TGLLFPQLGM SGRNGFDYAQ PIYLNLAPNY DDTLTPRYMS
     RRGLMLDNEF RYLYNGGRGE LLTAYMPNDE LRDRDRGRVM FNGYHNVDSH WQARANLAWV
     SDERYIEDFA NRLVGVTASN LQSTIGLYGT GQDWTAGIMA DRWQLTDYTL NESALAYNRQ
     PRLYFNWDKS LLPWLETGVY SEVVRFTHDD INFKYDASAG EDLQYTRNGL RQTDGIGVSG
     GSRLDLKPYV SFPISGAAWY VTPTLAYRYT AYQLDRGLVD GVNGIRGQIL RSQGIDPTTA
     TPEQLRGNTS PSRSMPIASL DAGLFFDRDT KIGGKSFLQT LEPRLFYLRT PYRNQDELPV
     FDTRDFTFSW GQLFRDSRYT GADRQNDANQ LTLALSTRFI DQTTGKERFS ASIGQIQYFD
     ESRVTVTPGG APVEKGKSAW IADSNYMIND RWTLGATYQW DPKYKREDLA SVRARYLMSN
     DGVVNLSYRY RINAGAAANA TKEERTLLEQ ADLSFLYPLN ERWSLVGRYY YSIQDSKPLE
     IIGGVQWDSC CLAVRAVARR YVRNREGDLN NSIQLEFVLK GLSSLGQDTD RTLRRAILGY
     NRDDLYLVPP SNTGASRDDY DPNQIP
//