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Database: UniProt
Entry: A0A364KL01_9EURO
LinkDB: A0A364KL01_9EURO
Original site: A0A364KL01_9EURO 
ID   A0A364KL01_9EURO        Unreviewed;       786 AA.
AC   A0A364KL01;
DT   07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT   07-NOV-2018, sequence version 1.
DT   24-JAN-2024, entry version 17.
DE   RecName: Full=HRDC domain-containing protein {ECO:0000259|PROSITE:PS50967};
GN   ORFNames=BHQ10_000237 {ECO:0000313|EMBL:RAO64225.1};
OS   Talaromyces amestolkiae.
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces;
OC   Talaromyces sect. Talaromyces.
OX   NCBI_TaxID=1196081 {ECO:0000313|EMBL:RAO64225.1, ECO:0000313|Proteomes:UP000249363};
RN   [1] {ECO:0000313|EMBL:RAO64225.1, ECO:0000313|Proteomes:UP000249363}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CIB {ECO:0000313|EMBL:RAO64225.1,
RC   ECO:0000313|Proteomes:UP000249363};
RX   PubMed=28649280; DOI=10.1186/s13068-017-0844-7;
RA   de Eugenio L.I., Mendez-Liter J.A., Nieto-Dominguez M., Alonso L.,
RA   Gil-Munoz J., Barriuso J., Prieto A., Martinez M.J.;
RT   "Differential ?-glucosidase expression as a function of carbon source
RT   availability in Talaromyces amestolkiae: a genomic and proteomic
RT   approach.";
RL   Biotechnol. Biofuels 10:161-161(2017).
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC       {ECO:0000256|ARBA:ARBA00004604}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RAO64225.1}.
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DR   EMBL; MIKG01000001; RAO64225.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A364KL01; -.
DR   STRING; 1196081.A0A364KL01; -.
DR   OrthoDB; 2880475at2759; -.
DR   Proteomes; UP000249363; Unassembled WGS sequence.
DR   GO; GO:0000176; C:nuclear exosome (RNase complex); IEA:InterPro.
DR   GO; GO:0000175; F:3'-5'-RNA exonuclease activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:InterPro.
DR   CDD; cd06147; Rrp6p_like_exo; 1.
DR   Gene3D; 1.10.150.80; HRDC domain; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR   InterPro; IPR012588; Exosome-assoc_fac_Rrp6_N.
DR   InterPro; IPR010997; HRDC-like_sf.
DR   InterPro; IPR002121; HRDC_dom.
DR   InterPro; IPR044876; HRDC_dom_sf.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR045092; Rrp6-like.
DR   PANTHER; PTHR12124:SF47; EXOSOME COMPONENT 10; 1.
DR   PANTHER; PTHR12124; POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED; 1.
DR   Pfam; PF01612; DNA_pol_A_exo1; 1.
DR   Pfam; PF00570; HRDC; 1.
DR   Pfam; PF08066; PMC2NT; 1.
DR   SMART; SM00474; 35EXOc; 1.
DR   SMART; SM00341; HRDC; 1.
DR   SUPFAM; SSF47819; HRDC-like; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50967; HRDC; 1.
PE   4: Predicted;
KW   Exosome {ECO:0000256|ARBA:ARBA00022835};
KW   Reference proteome {ECO:0000313|Proteomes:UP000249363};
KW   rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT   DOMAIN          450..530
FT                   /note="HRDC"
FT                   /evidence="ECO:0000259|PROSITE:PS50967"
FT   REGION          624..729
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          764..786
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        624..646
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        647..670
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        671..687
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   786 AA;  88513 MW;  C4286962A5447CA1 CRC64;
     MDNSADFSSF QEKVTAALIK STQTVKKIGD EDVDFHRTSS TEFAENLDEQ STRILSLTSS
     LLKVATGGTD INPPVLEDED AIEDNWRGIV DVIDNLLEKA DACLDEFTGI IKKLSPPQQD
     RIREASTRQQ EKKFPTIYDY GPSKIPKPQL QFRNAPNNHD TAPFRPLLKS KPHAIVPLEK
     SLQLVETEKK PAFYPNPYEK EIRDAKYPES AYVVAPPVEF GPVETTQAVW VDTPEGVTEM
     VKELKKAKEI AVDLEHHDVH TYYGLVSLMQ ISTRDKDWVV DTLQPWREDL QQLNEVFADP
     NILKVLHGST MDIVWLQRDL GLYVVGLFDT YHAAVALGLS KRSLKFLLEK YAHYEADKKY
     QMADWRLRPL TEEMLKYARA DTHYLLYIYD CLRNELLERS TPKRNQIDYV LERSKTEALQ
     RYERPVYDMA GGQGAGGWYD LLSRNSALFS KEQFAVFKAV HEWRDRVARE EDEGLQCVFP
     RHMLFKVAVA MPVDRHTLFK TLSPVTLIVK DRINELLALI KKAKIEGATG PELRDVIKPR
     KTVEEAILSA TKPSPLLTGE PTVVSVVRAD SSQFWGAALQ AAESAVVPPN YKVAASLEAL
     RLSVPIPPMP VTVSEVRQMV QETTTPAVTS VEPSPMNTPS TNKADKRSDI FTVKEVAPRH
     KRKAIEVVED SDETSSSGGS SASESESSSS SEEEESEEEI QVQKPPTKKS RKEKKPQRKP
     QEEDTIPFDY NAASSVLHSE DMAAAAAAAN LPNQKKYFNP YAKSLNAPSG VRKQKKETSG
     RTFTFR
//
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