ID A0A364KL01_9EURO Unreviewed; 786 AA.
AC A0A364KL01;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE RecName: Full=HRDC domain-containing protein {ECO:0000259|PROSITE:PS50967};
GN ORFNames=BHQ10_000237 {ECO:0000313|EMBL:RAO64225.1};
OS Talaromyces amestolkiae.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces;
OC Talaromyces sect. Talaromyces.
OX NCBI_TaxID=1196081 {ECO:0000313|EMBL:RAO64225.1, ECO:0000313|Proteomes:UP000249363};
RN [1] {ECO:0000313|EMBL:RAO64225.1, ECO:0000313|Proteomes:UP000249363}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CIB {ECO:0000313|EMBL:RAO64225.1,
RC ECO:0000313|Proteomes:UP000249363};
RX PubMed=28649280; DOI=10.1186/s13068-017-0844-7;
RA de Eugenio L.I., Mendez-Liter J.A., Nieto-Dominguez M., Alonso L.,
RA Gil-Munoz J., Barriuso J., Prieto A., Martinez M.J.;
RT "Differential ?-glucosidase expression as a function of carbon source
RT availability in Talaromyces amestolkiae: a genomic and proteomic
RT approach.";
RL Biotechnol. Biofuels 10:161-161(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RAO64225.1}.
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DR EMBL; MIKG01000001; RAO64225.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A364KL01; -.
DR STRING; 1196081.A0A364KL01; -.
DR OrthoDB; 2880475at2759; -.
DR Proteomes; UP000249363; Unassembled WGS sequence.
DR GO; GO:0000176; C:nuclear exosome (RNase complex); IEA:InterPro.
DR GO; GO:0000175; F:3'-5'-RNA exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:InterPro.
DR CDD; cd06147; Rrp6p_like_exo; 1.
DR Gene3D; 1.10.150.80; HRDC domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR012588; Exosome-assoc_fac_Rrp6_N.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR002121; HRDC_dom.
DR InterPro; IPR044876; HRDC_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR045092; Rrp6-like.
DR PANTHER; PTHR12124:SF47; EXOSOME COMPONENT 10; 1.
DR PANTHER; PTHR12124; POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR Pfam; PF00570; HRDC; 1.
DR Pfam; PF08066; PMC2NT; 1.
DR SMART; SM00474; 35EXOc; 1.
DR SMART; SM00341; HRDC; 1.
DR SUPFAM; SSF47819; HRDC-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50967; HRDC; 1.
PE 4: Predicted;
KW Exosome {ECO:0000256|ARBA:ARBA00022835};
KW Reference proteome {ECO:0000313|Proteomes:UP000249363};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT DOMAIN 450..530
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
FT REGION 624..729
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 764..786
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 624..646
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 647..670
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 671..687
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 786 AA; 88513 MW; C4286962A5447CA1 CRC64;
MDNSADFSSF QEKVTAALIK STQTVKKIGD EDVDFHRTSS TEFAENLDEQ STRILSLTSS
LLKVATGGTD INPPVLEDED AIEDNWRGIV DVIDNLLEKA DACLDEFTGI IKKLSPPQQD
RIREASTRQQ EKKFPTIYDY GPSKIPKPQL QFRNAPNNHD TAPFRPLLKS KPHAIVPLEK
SLQLVETEKK PAFYPNPYEK EIRDAKYPES AYVVAPPVEF GPVETTQAVW VDTPEGVTEM
VKELKKAKEI AVDLEHHDVH TYYGLVSLMQ ISTRDKDWVV DTLQPWREDL QQLNEVFADP
NILKVLHGST MDIVWLQRDL GLYVVGLFDT YHAAVALGLS KRSLKFLLEK YAHYEADKKY
QMADWRLRPL TEEMLKYARA DTHYLLYIYD CLRNELLERS TPKRNQIDYV LERSKTEALQ
RYERPVYDMA GGQGAGGWYD LLSRNSALFS KEQFAVFKAV HEWRDRVARE EDEGLQCVFP
RHMLFKVAVA MPVDRHTLFK TLSPVTLIVK DRINELLALI KKAKIEGATG PELRDVIKPR
KTVEEAILSA TKPSPLLTGE PTVVSVVRAD SSQFWGAALQ AAESAVVPPN YKVAASLEAL
RLSVPIPPMP VTVSEVRQMV QETTTPAVTS VEPSPMNTPS TNKADKRSDI FTVKEVAPRH
KRKAIEVVED SDETSSSGGS SASESESSSS SEEEESEEEI QVQKPPTKKS RKEKKPQRKP
QEEDTIPFDY NAASSVLHSE DMAAAAAAAN LPNQKKYFNP YAKSLNAPSG VRKQKKETSG
RTFTFR
//