ID A0A366I3H6_9GAMM Unreviewed; 915 AA.
AC A0A366I3H6;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE SubName: Full=Type IV secretion system protein VirB4 {ECO:0000313|EMBL:RBP60988.1};
GN ORFNames=DES54_12840 {ECO:0000313|EMBL:RBP60988.1};
OS Brenneria salicis ATCC 15712 = DSM 30166.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Pectobacteriaceae; Brenneria.
OX NCBI_TaxID=714314 {ECO:0000313|EMBL:RBP60988.1, ECO:0000313|Proteomes:UP000253046};
RN [1] {ECO:0000313|EMBL:RBP60988.1, ECO:0000313|Proteomes:UP000253046}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 30166 {ECO:0000313|EMBL:RBP60988.1,
RC ECO:0000313|Proteomes:UP000253046};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the TrbE/VirB4 family.
CC {ECO:0000256|ARBA:ARBA00006512}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RBP60988.1}.
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DR EMBL; QNRY01000028; RBP60988.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A366I3H6; -.
DR OrthoDB; 9816422at2; -.
DR Proteomes; UP000253046; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 1.
DR Gene3D; 1.10.8.730; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR043964; P-loop_TraG.
DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB.
DR PANTHER; PTHR30121:SF6; TYPE IV SECRETION SYSTEM PROTEIN CAGE; 1.
DR PANTHER; PTHR30121; UNCHARACTERIZED PROTEIN YJGR-RELATED; 1.
DR Pfam; PF03135; CagE_TrbE_VirB; 1.
DR Pfam; PF19044; P-loop_TraG; 1.
DR Pfam; PF05101; VirB3; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..45
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 271..472
FT /note="CagE TrbE VirB component of type IV transporter
FT system central"
FT /evidence="ECO:0000259|Pfam:PF03135"
FT DOMAIN 535..820
FT /note="TraG P-loop"
FT /evidence="ECO:0000259|Pfam:PF19044"
FT COILED 371..398
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 915 AA; 104138 MW; B9A140605A72A689 CRC64;
MTTLNKALTR PAAIMGIPLV PFVIVSGTLV LLSVYLSYYL ALLLIPAWIE MKSKARTDIH
YFGLLWLAFK TRGRFATNRH YGANAMLANR YDAVDVSEFT KKMKLNERIT LDKYIPYSSH
IHPQVIRNRH GDLVATWELA GVVFECEDEH HLTFLATHLN NVIRSYEGLP VTFYIHRIRE
QYRDAFEAHS GIPFADEVSA RYYRPIKDKP FWRHRLFFTV CYAPFSRLEK KAMKRQPVGK
RHAALDDALK AMLEHQEALT SALSRYMATP LGVYEENGRV YSSQLAFYHR LLTGKWQKVA
VTHSPFYDTL STPDVFFSTD TAECQTVDGS RFFRSLEIKD YSPQTHTGLL DALLYAKSEY
VLTQSFTCMA RDEAQNHIRL AEKRLNSADD DAISQREELI VLRDLLQSGH ISCGKYHFSL
LVSSNSADRV VKDTNALAQP FADLGIMTSL STLSLPAAYL AQLPGVYTLR PRLVAVSSQN
FADMASLHNF HPHKRDGNPW GEAIAILTSP GGGGYYLNLH DSQAGRDDFN EKTPGNTAII
GKTGSGKTLL MTMMQQLMQK YRNPATFAVS ATIKRLTTVY FDKDRAAEMS IRQMGGRYFR
IRTGVPSGFN PFSLAPSRRN ISFIKRLVRM LCRRNGKPLD PRDEERISTA VDTIMLDYPP
EYRRYGITRL LEVLPEPPTK DARTNGLRIR LKQWAQGGEF GWVFDNEEDT FTISDIDNFG
IDGTEFLDDD DIRGPITFYL LYRVTSLLDG RRLVMFMDEF WKWLADVEFS RFSLNMLKVI
RKLNGIFIPA TQSPDEIVKH PIAPAIIEQC GTQIFLANPK ASQADYVEKM KVPESVYDIV
RNLDPGEHYM VVLKTPLRAG ETRPFVSMAK MDLSGLGKIT KLLSGSEDNL KIFDALYQDG
MKHEEWKASF LKQAI
//