ID A0A368GHQ3_ANCCA Unreviewed; 446 AA.
AC A0A368GHQ3;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE SubName: Full=Pre-mRNA cleavage complex II protein Clp1 {ECO:0000313|EMBL:RCN43903.1};
GN ORFNames=ANCCAN_10104 {ECO:0000313|EMBL:RCN43903.1};
OS Ancylostoma caninum (Dog hookworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Strongylida;
OC Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.
OX NCBI_TaxID=29170 {ECO:0000313|EMBL:RCN43903.1, ECO:0000313|Proteomes:UP000252519};
RN [1] {ECO:0000313|EMBL:RCN43903.1, ECO:0000313|Proteomes:UP000252519}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Baltimore {ECO:0000313|EMBL:RCN43903.1,
RC ECO:0000313|Proteomes:UP000252519};
RA Mitreva M.;
RT "Draft genome of the hookworm Ancylostoma caninum.";
RL Submitted (OCT-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RCN43903.1}.
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DR EMBL; JOJR01000143; RCN43903.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A368GHQ3; -.
DR STRING; 29170.A0A368GHQ3; -.
DR Proteomes; UP000252519; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0051731; F:polynucleotide 5'-hydroxyl-kinase activity; IEA:InterPro.
DR GO; GO:0031124; P:mRNA 3'-end processing; IEA:InterPro.
DR Gene3D; 2.60.120.1030; Clp1, DNA binding domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.330; Pre-mRNA cleavage complex subunit Clp1, C-terminal domain; 1.
DR InterPro; IPR045116; Clp1/Grc3.
DR InterPro; IPR010655; Clp1_C.
DR InterPro; IPR038238; Clp1_C_sf.
DR InterPro; IPR032324; Clp1_N.
DR InterPro; IPR038239; Clp1_N_sf.
DR InterPro; IPR032319; CLP1_P.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR12755; CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P; 1.
DR PANTHER; PTHR12755:SF6; POLYRIBONUCLEOTIDE 5'-HYDROXYL-KINASE CLP1; 1.
DR Pfam; PF06807; Clp1; 1.
DR Pfam; PF16573; CLP1_N; 1.
DR Pfam; PF16575; CLP1_P; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000252519}.
FT DOMAIN 11..100
FT /note="Clp1 N-terminal beta-sandwich"
FT /evidence="ECO:0000259|Pfam:PF16573"
FT DOMAIN 122..241
FT /note="Polyribonucleotide 5'-hydroxyl-kinase Clp1 P-loop"
FT /evidence="ECO:0000259|Pfam:PF16575"
FT DOMAIN 329..438
FT /note="Pre-mRNA cleavage complex subunit Clp1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF06807"
SQ SEQUENCE 446 AA; 49438 MW; 048A87CD8997367D CRC64;
MSEEPKLQEF TLKEDHELRF EVGNTEVVLE LVQGRAEVFG TELEMHKKYA FPPNTRVAVF
SWKGASVELI GPTNSAYVAE HTPMVIYLNT HAALEQLRQH SEEQVAVGGG ENPKGPRIML
VGPTDVGKST VCRILCNYAV RQGRSPVFID LDVGQGSISV PGTIGALFIN KTADVVEGFD
RSKPLVYNFG HISPGENLPL YDLLVKELAD SVTLRCATHP EANLGGLVIN TCGWVTGEGL
SRRRLLLDGP NVTPALLPRR RLLKWMSLLY LIMKGYTTNC SATYLLLSRL ILHQPKSGGV
ETRSRQSRIA ARSASIHRYF YGVHSNPYFP FTFELSFNEV IFCKIGTEKL PESCLPFGSK
VEDHQTKVVT INPSTDMAHR MFAVTPCPTV SQAVLKASVL GFVVITEINM EEKRMSMLCP
QSSLSHKVLV WTDVTFLDDQ VTRAAD
//