ID   A0A368JJR0_9BACT        Unreviewed;       641 AA.
AC   A0A368JJR0;
DT   07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT   07-NOV-2018, sequence version 1.
DT   27-MAR-2024, entry version 25.
DE   SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:RCR67899.1};
GN   ORFNames=DUE52_19435 {ECO:0000313|EMBL:RCR67899.1};
OS   Larkinella punicea.
OC   Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
OC   Larkinella.
OX   NCBI_TaxID=2315727 {ECO:0000313|EMBL:RCR67899.1, ECO:0000313|Proteomes:UP000253383};
RN   [1] {ECO:0000313|EMBL:RCR67899.1, ECO:0000313|Proteomes:UP000253383}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=zzj9 {ECO:0000313|Proteomes:UP000253383};
RA   Zhou Z., Wang G.;
RT   "Genome analysis of Larkinella rosea.";
RL   Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RCR67899.1}.
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DR   EMBL; QOWE01000016; RCR67899.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A368JJR0; -.
DR   OrthoDB; 9779074at2; -.
DR   Proteomes; UP000253383; Unassembled WGS sequence.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR   Gene3D; 3.40.50.10070; TolB, N-terminal domain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR43280; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR43280:SF2; BIFUNCTIONAL TRANSCRIPTIONAL ACTIVATOR_DNA REPAIR ENZYME ADAA; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SMART; SM00028; TPR; 3.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF48452; TPR-like; 2.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
DR   PROSITE; PS50005; TPR; 1.
PE   4: Predicted;
KW   TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT   DOMAIN          10..109
FT                   /note="HTH araC/xylS-type"
FT                   /evidence="ECO:0000259|PROSITE:PS01124"
FT   REPEAT          410..443
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
SQ   SEQUENCE   641 AA;  72634 MW;  7EEFFFA3BB3192F9 CRC64;
     MVGSDDLFLP KLISLIDSNL INPSFSAEII CREMGVSRSG LHRLVKEHTG LSVTLFIRRY
     RLEKAKILLK TTELRSVEIA ELVGIPNPQN FSKYFTEAYA VSPSEYRKLP PETDHFIPDP
     EPIVADTMPI IAEPKPIRQQ PVSPPVTDSR RRYRYLIPGL LVAGLALLVW LRFGRQTDDL
     QTSSGFDSSI AILPFRNLGT AETQYFSEGV REQVQVALAY IPQVKVISRT STQSYEKTAK
     TVPQIARELD VSYLLEGSAL QLGNRIKLSV ALIRAEENQT VWTKTYEGET KDLWAFTSTV
     AKTIAGELNQ QLSSIIRKKM DKAPTLNPTA MTEYLKGEYF LRTRTKEGLN NSLINLNRAI
     ALDSGFAEAY ASKAQVYFLY FEEGYADADS SMKRAEQNAL TAIRLDSENA NAFALLAKLY
     QRQSKWEQAL TTIRIALQYQ PNNALTNYWY SLMLRSVGEA DRAIEYSTKA LRIDPLFPVI
     MIGHLGNLTY AGRFEEARQV MEEGQRLHAS AYGWYWSTAF YYINQNRWPE ALRELEKAQR
     LNPDTRSFPV FIAYVKARMH QPAAARALLD SLPDDVTHYP YRSVLYIGLG DTDRCLTYLE
     KGAEVGSLPD YLKVSPVFKS LRNTPRFQAV IRKVGLDKTA F
//