ID   A0A368JMX3_9BACT        Unreviewed;       198 AA.
AC   A0A368JMX3;
DT   07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT   07-NOV-2018, sequence version 1.
DT   27-MAR-2024, entry version 28.
DE   RecName: Full=Sigma-70 family RNA polymerase sigma factor {ECO:0008006|Google:ProtNLM};
GN   ORFNames=DUE52_14065 {ECO:0000313|EMBL:RCR69007.1};
OS   Larkinella punicea.
OC   Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
OC   Larkinella.
OX   NCBI_TaxID=2315727 {ECO:0000313|EMBL:RCR69007.1, ECO:0000313|Proteomes:UP000253383};
RN   [1] {ECO:0000313|EMBL:RCR69007.1, ECO:0000313|Proteomes:UP000253383}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=zzj9 {ECO:0000313|Proteomes:UP000253383};
RA   Zhou Z., Wang G.;
RT   "Genome analysis of Larkinella rosea.";
RL   Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|ARBA:ARBA00010641}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RCR69007.1}.
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DR   EMBL; QOWE01000010; RCR69007.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A368JMX3; -.
DR   OrthoDB; 9150024at2; -.
DR   Proteomes; UP000253383; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   Gene3D; 1.10.1740.10; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70-like.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR43133:SF46; ECF RNA POLYMERASE SIGMA FACTOR SIGG; 1.
DR   PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   3: Inferred from homology;
FT   DOMAIN          32..98
FT                   /note="RNA polymerase sigma-70 region 2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          135..184
FT                   /note="RNA polymerase sigma factor 70 region 4 type 2"
FT                   /evidence="ECO:0000259|Pfam:PF08281"
FT   REGION          109..131
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        113..131
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   198 AA;  23245 MW;  91E0E64EC2D5E1A3 CRC64;
     MHRKTHSEKR TEEDLLLWTA LRASDRNALG KLFDAYVRDL LTYGYRFCQD MALTKDAVQD
     VFVDLWAYRE TLSPTVEVRF YLYSCLRRTL LKLLKDRQHL SSDWAEAEMT SPAEDSAETQ
     WMESETGDQQ QARISNGLQT LSKREYEVVS LKYYTGLKIR QIATLLDLKE QTVANTLQNA
     LLKLRKHLVH LLFLYLLF
//