ID A0A368MFV5_9FLAO Unreviewed; 423 AA.
AC A0A368MFV5;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=Sigma-54-dependent Fis family transcriptional regulator {ECO:0000313|EMBL:RCT55459.1};
GN ORFNames=DUZ96_03995 {ECO:0000313|EMBL:RCT55459.1};
OS Winogradskyella sp. KYW1333.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Winogradskyella.
OX NCBI_TaxID=2282123 {ECO:0000313|EMBL:RCT55459.1, ECO:0000313|Proteomes:UP000253188};
RN [1] {ECO:0000313|EMBL:RCT55459.1, ECO:0000313|Proteomes:UP000253188}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KYW1333 {ECO:0000313|EMBL:RCT55459.1,
RC ECO:0000313|Proteomes:UP000253188};
RA Yang H.G., Seong C.N.;
RT "Complete genome sequence of Winogradskyella aestuarii KYW1333 isolated
RT from seawater.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RCT55459.1}.
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DR EMBL; QPHL01000013; RCT55459.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A368MFV5; -.
DR OrthoDB; 5401077at2; -.
DR Proteomes; UP000253188; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071:SF120; L-LYSINE AMINOMUTASE REGULATOR; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000253188};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 13..242
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 423 AA; 48051 MW; 48EFA8575D246557 CRC64;
MESVQAIKQR FGIIGNDPKL NRALEKAIQV APTDISVLVT GESGVGKESV PKIIHQLSHR
KHGKYIAVNC GAIPEGTIDS ELFGHEKGAF TGATQTRSGY FEVADGGTIF LDEVGELPLT
TQVRLLRVLE NGEFIKVGSS KVQKTNVRIV AATNINMFEA IKKERFREDL YYRLSTVEIN
LPALRERKDD IHLLFRKFAS DFALKYKMPT VKLVDDAVGL LLKYRWNGNI RQLRNVAEQI
SVLEQNRTIN STTLKQYLPN AGNNLPAVIS TTKPESDFSS EREILYKVLF DMKSDLNDLK
KLTMELMKKG SVSDVQKEHE HLIQKIYGED DQDPIKTNTV VDDLEVLSIP EHTETIENKT
LEVEDKYHFA EEIEEEETLS LHDKELELIK KSLERHNGKR KLAAAELGIS ERTLYRKIKQ
YDL
//
