ID A0A368PHL4_SETIT Unreviewed; 881 AA.
AC A0A368PHL4;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE RecName: Full=Clp R domain-containing protein {ECO:0000259|PROSITE:PS51903};
GN ORFNames=SETIT_1G061300v2 {ECO:0000313|EMBL:RCV05169.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV05169.1};
RN [1] {ECO:0000313|EMBL:RCV05169.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV05169.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV05169.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV05169.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
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DR EMBL; CM003528; RCV05169.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A368PHL4; -.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0042026; P:protein refolding; IEA:InterPro.
DR GO; GO:0009408; P:response to heat; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR017730; Chaperonin_ClpB.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR03346; chaperone_ClpB; 1.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF86; CHAPERONE PROTEIN CLPB4, MITOCHONDRIAL; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 1..138
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT COILED 404..525
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 881 AA; 98663 MW; 79C1AB04345FA4D9 CRC64;
MAWEGIVGAV DAARLSKQQI VESEHLMKAL LEQKDGLARR IFSKAGVDNT SVLQATDEFI
SRQPKVSGDT SGPIIGSSFV SILDSAKKHK KEYGDEFVSV EHILQAFTSD KRFGQQLFKD
LKIMENDLKE AISAVRGSQR VTDQNPEGKY QALEKYGIDL TESARRGKLD PVIGRDDEVR
RCIQILCRRT KNNPVIIGEP GVGKTAIAEG LAQRIVRGDV PEPLMNRRLI SLDMGALLAG
AKFRGEFEER LKAVLKEVTA SNGQIILFID EIHTVVGAGA AGGAMDAGNL LKPMLGRGEL
RCIGATTLDE YRKYIEKDAA LERRFQQVYC GEPAVEDTIS ILRGLRERYE LHHGVKISDG
ALVAAAVLSD RYITGRFLPD KAIDLVDEAA AKLKMEITSK PIELDEVDRE IIRLEMEKLS
LKNDTDKASK ERLSKLEAEL ESLKQKQKNL SEHWEYEKSL MTRIGSIKEE TDRVNLEIEA
AEREYDLSRA AELKYGTLLS LQKQLEEAEN KLVEFQQSGK SMLREEVTDV DIAEIVSKWT
GIPVSNLQQS EREKLLLLED VLHKRVIGQD IAVKSVANAI RRSRAGLSDP NRPIASFMFM
GPTGVGKTEL GKTLAEFLFN TENALIRIDM SEYMEKHAVS RLVGAPPGYV GYEEGGQLTE
SVRRRPYSVV LFDEIEKAHQ DVFNILLQLL DDGRITDSQG RTVSFTNCVI IMTSNIGSPL
ILDTLRNTTD SKEAVYEIMK KQVIEMARQT FRPEFLNRID EYIVFQPLDT SEINHIVEIQ
LNRVKNRLKQ QKIRLQYTPE AVELLGSLGF DPNYGARPVK RVIQQMVENE IALGVLKGDF
KEDDTILVDV SSAAIAKGLA PQKKLVLQRV ENRSEELVAN D
//