ID A0A368PSA1_SETIT Unreviewed; 1378 AA.
AC A0A368PSA1;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=PHD-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SETIT_1G333500v2 {ECO:0000313|EMBL:RCV08522.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV08522.1};
RN [1] {ECO:0000313|EMBL:RCV08522.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV08522.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV08522.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV08522.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM003528; RCV08522.1; -; Genomic_DNA.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15571; ePHD; 2.
DR CDD; cd15492; PHD_BRPF_JADE_like; 1.
DR CDD; cd15489; PHD_SF; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 4.
DR InterPro; IPR034732; EPHD.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13793:SF107; PHD FINGER FAMILY PROTEIN; 1.
DR PANTHER; PTHR13793; PHD FINGER PROTEINS; 1.
DR Pfam; PF13831; PHD_2; 1.
DR Pfam; PF13832; zf-HC5HC2H_2; 2.
DR SMART; SM00249; PHD; 4.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR PROSITE; PS51805; EPHD; 2.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603};
KW Transferase {ECO:0000256|ARBA:ARBA00022603};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 285..336
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 347..471
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT DOMAIN 1086..1135
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 1157..1266
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT REGION 64..83
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 165..187
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 477..502
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 884..912
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1017..1076
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 171..187
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 884..911
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1042..1076
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1378 AA; 151980 MW; 8FB22DA7963A3953 CRC64;
MSGEMARAEV SPEGAAPGFG ADLYAQATKA LALRTPFEGE EAASRVPTLP ARLVSWAGPG
DARKKHKKIQ LPPPDDAAVE PPPPAAAKVG LWEQFEAYFR PVTLADVEML KPKLPFGYSK
LDSCMLIPFL GTGEELMNQG ETYDVAVFET SSYLGVGGAE VVSNRERGDQ SGHLLSQKEK
RDQNVDPDIH DVVVQQMVSD KDISRRSRVS IQPGGRPFEV DQAVSNGIVS AQCAEEEGSS
LNWLLGATGR FVLTSERPNK KRKLLGVAAG LEQLVLLPRL GAEKSSTCDV CCLGESSMDS
NRIVNCSNCK VSVHQKCYGL RVVPDGQWLC AWCTYLESNK DSGSTQPTPC VLCPKEKGAL
KPVKVEPTQT ADVSHLKFAH LFCSLWAPEV FVEDMESMEP VTNLDNVQEN RMKLTCSICK
IKHGACVRCS HGTCRAAFHP ICARESKHQM EIWGKSRHSN VELRAFCSKH SSVGYTSSVE
NSNHASEQSP TESGPNNTNL ITGKIPKLRF TRKNKDKFMN CETSASSSGN LIRVETTEQD
ALANTVRNAN AQPIRSRETG TGHPSVGGDR MRSPGDIAVV LRKLIDSGKV SVGDIASEVG
ISSESLEAAL VGETTTFSHG LMLKIINWLQ NSVHMHAVQG NACKGNSVVL QDDNSDGFDT
TDTIDMKISS VPDDDKDVFV DVSDSAVTEP TLRRTKSNSK ILEEDNATCA TGVTILQNGN
KNMVKDGADL ECSPAKEFAK ESTREFSPIG SKGVSKEEKG KLILNNTSGN NEFGTSMEIP
NENRGVLLGR KNDNLTEAGL GSGLKEGVSS PDHCFSQGDH ARDGENSIEN GFRTPRHCDS
NCSHGQPFFN FDDSHSYIHP FIKKKISHHW DITFNQNKEA LNHHVEEPSC PSHEKIPVDS
SEEHEDATDT AASDQVLKAS SLEILEHAPD DEVEGEIVYL QARLLDNAVV LKHRYEKLIA
KVVQNISREL DAFSRRKWDL IFVNQFLRDV REAKKRGRKE KRHKEAQAVL AAAAAAAASS
SRNSTMRKDA KEDAAPANQE SSPKLVAGSS RVGQRTKDSS KSSNSKLPPD NKFGSFHMPI
SSNENALHCD VCMRTETLLN RIFICSRCKA AVHIDCYRNL ENSIGPWKCE LCEDQDISLE
TPTTSDKLDC NGKKSPFARC GMCHGTSGAF RKTADGQWVH AFCAEWLLDT KYVRGQENPV
EGMESLVEGK DTCCLCLRKV GLCLRCSSGD CHITFHPTCA RNSGFYMNTK GFGTTSQHKA
YCGKHSAQQK EEDAQRYGLE ELRSMKRMRV ELEKLRLLCE RVIKREKVKV CIPGNFTTYV
VLKVELYEYM TVMLELEMLH GTMGHSVFTF SPTDLFYSNC CNLLHVWWFD IYHIFNSC
//
