ID   A0A368PT76_SETIT        Unreviewed;      1237 AA.
AC   A0A368PT76;
DT   07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT   07-NOV-2018, sequence version 1.
DT   27-MAR-2024, entry version 23.
DE   RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=SETIT_1G359500v2 {ECO:0000313|EMBL:RCV08842.1};
OS   Setaria italica (Foxtail millet) (Panicum italicum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX   NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV08842.1};
RN   [1] {ECO:0000313|EMBL:RCV08842.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Yugu1 {ECO:0000313|EMBL:RCV08842.1};
RX   PubMed=22580951; DOI=10.1038/nbt.2196;
RA   Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA   Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA   Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA   Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA   Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA   Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT   "Reference genome sequence of the model plant Setaria.";
RL   Nat. Biotechnol. 30:555-561(2012).
RN   [2] {ECO:0000313|EMBL:RCV08842.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Yugu1 {ECO:0000313|EMBL:RCV08842.1};
RA   Noorani M.;
RL   Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   EMBL; CM003528; RCV08842.1; -; Genomic_DNA.
DR   RefSeq; XP_004954297.1; XM_004954240.2.
DR   RefSeq; XP_004954298.1; XM_004954241.2.
DR   AlphaFoldDB; A0A368PT76; -.
DR   STRING; 4555.A0A368PT76; -.
DR   GeneID; 101781393; -.
DR   KEGG; sita:101781393; -.
DR   OrthoDB; 1205686at2759; -.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0032453; F:histone H3K4 demethylase activity; IEA:UniProt.
DR   GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR   Gene3D; 3.30.160.360; -; 1.
DR   Gene3D; 2.60.120.650; Cupin; 1.
DR   InterPro; IPR003889; FYrich_C.
DR   InterPro; IPR003888; FYrich_N.
DR   InterPro; IPR003347; JmjC_dom.
DR   InterPro; IPR003349; JmjN.
DR   InterPro; IPR004198; Znf_C5HC2.
DR   PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR   PANTHER; PTHR10694:SF98; LYSINE-SPECIFIC DEMETHYLASE JMJ16-RELATED; 1.
DR   Pfam; PF05965; FYRC; 1.
DR   Pfam; PF05964; FYRN; 1.
DR   Pfam; PF02373; JmjC; 1.
DR   Pfam; PF02375; JmjN; 1.
DR   Pfam; PF02928; zf-C5HC2; 1.
DR   SMART; SM00542; FYRC; 1.
DR   SMART; SM00541; FYRN; 1.
DR   SMART; SM00558; JmjC; 1.
DR   SMART; SM00545; JmjN; 1.
DR   SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR   PROSITE; PS51543; FYRC; 1.
DR   PROSITE; PS51542; FYRN; 1.
DR   PROSITE; PS51184; JMJC; 1.
DR   PROSITE; PS51183; JMJN; 1.
PE   4: Predicted;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          183..224
FT                   /note="JmjN"
FT                   /evidence="ECO:0000259|PROSITE:PS51183"
FT   DOMAIN          378..544
FT                   /note="JmjC"
FT                   /evidence="ECO:0000259|PROSITE:PS51184"
FT   REGION          62..112
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          246..291
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        94..109
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        251..265
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        274..290
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1237 AA;  137336 MW;  7771D0EE13ADA9B8 CRC64;
     MAPSGVEMVV LARLPLGFGH SVHFHRIMGT ECIMATLNAD PEPSFPPGFE PFIDLALRGI
     QDDAKPDDTH SSSVQVVQST EKDVEILEPS SAHCRSGTPA STSGSHGCRK SLRNRPPIDY
     SLFDLISDEE SEVELAEKGV RPMRRRQQLP KGVLRGCAEC ADCQKVVARW NPSGARRPVL
     EEAPVYYPSE EEFKDTLKYI ESIRPVAEPY GICRIVPPSS WKPPCLLKEK NVWECSKFST
     RVQKVDKLQN RKSSKKSRRG GMIKKRRKLS EPEDIGNINS NQTGMQQSQE RFGFEPGPEF
     TLQTFKKYAD SFSDQYFNKD ACGDLPPSVE DIEGEYWRIV ESPTEEIEVI YGADLETGTF
     GSGFPKSSHE VKSDVERKYA ESGWNLNNLP RLQGSVLSFE GGDISGVLIP WVYVGMCFSS
     FCWHVEDHHL YSLNYMHWGA PKMWYGVPGK DAVNLEVAMR KHLPDLFEEQ PDLLHNLVTQ
     FSPSLLKSEG VPVYRCVQHE GEFVLTFPRA YHAGFNCGFN CAEAVNVAPL DWLPIGQDAV
     ELYREQARKI TISHDKLLLG AAREAIRAQW DILFLKRNTA DNLRWKSMCG PDSTICKSLK
     ARIQMELTQR KDICSPSQCR KIDAEFDSAD RECAFCYYDL HLSACGCPCS PEKYTCLIHS
     KQLCSCDWGK RFFLFRYDVN ELNILADALG GKLSAIHRWG VSHLGLSLSS CVKQEKDQDL
     KTLSRATDGP RRSYMSQAST VLLSPSLVCN EQKSSGNKML NSGCSEINTA CPSAEQLKSA
     NVSPQKEPWV KNDLACTLNN GVSQLQYNGG PGGHKNSALG LPIPSGVSFS SNVATRPFST
     SGDIHMRNAY SSLPVMVDHG SNMKPSLESS NNSHRLMTSS TNASLCYSYK DKMHITTETN
     GLVTTEKDSC QARAASSQPF VRTVSRAQIV SQEASASIFA SKPPVGPSVV KNTYGGFSSG
     SAHFGYPNFG NPLPNDGCLQ RKSESLSGLE ARGHSPLLVQ PALENGSPQK GPRIANVVHR
     FKSSVELLEI GAVVSGRLWS SSKAIFPKGF RSRVKYFSIV DPTQMAYYIS EILDAGLQGP
     LFMVTLENCP GEVFINVSPT KCWSLVRERL NMEIRRQLSM GRANLPTLQP PGSVDGLEMF
     GFSSLAIVQA IEAQDVDSIC TEYWRSRPHV VAGDHDSRHM PPPQGPPHIA LRGLFQRASR
     DELRALRSLL TSNSSLDDRT RQQAAQILDE EIAKQWR
//