ID A0A368Q1Z4_SETIT Unreviewed; 887 AA.
AC A0A368Q1Z4;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 08-NOV-2023, entry version 24.
DE RecName: Full=USP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SETIT_2G235700v2 {ECO:0000313|EMBL:RCV12035.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV12035.1};
RN [1] {ECO:0000313|EMBL:RCV12035.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV12035.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV12035.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV12035.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the peptidase C19 family.
CC {ECO:0000256|ARBA:ARBA00009085}.
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DR EMBL; CM003529; RCV12035.1; -; Genomic_DNA.
DR RefSeq; XP_004957062.1; XM_004957005.2.
DR AlphaFoldDB; A0A368Q1Z4; -.
DR GeneID; 101780061; -.
DR KEGG; sita:101780061; -.
DR OrthoDB; 227085at2759; -.
DR GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR001394; Peptidase_C19_UCH.
DR InterPro; IPR018200; USP_CS.
DR InterPro; IPR028889; USP_dom.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR24006:SF892; OS09G0464400 PROTEIN; 1.
DR PANTHER; PTHR24006; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR Pfam; PF00443; UCH; 1.
DR Pfam; PF01753; zf-MYND; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR PROSITE; PS00972; USP_1; 1.
DR PROSITE; PS50235; USP_3; 1.
DR PROSITE; PS01360; ZF_MYND_1; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 109..146
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
FT DOMAIN 345..650
FT /note="USP"
FT /evidence="ECO:0000259|PROSITE:PS50235"
FT REGION 234..257
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 274..302
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 666..687
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 730..751
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 827..853
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 235..257
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 833..853
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 887 AA; 98043 MW; 0936748853D43660 CRC64;
MELSTAVALV VAVALMALGM AATGWLQRAE ARRLEVRRLA WQAAEEVEIA EREEAYYYGQ
YGGEFVSASD VPEAPPLWAA PEVDPSPKEA VVEDEVAVAA STPPGKGVCA MCARPTTLRC
KRCKSVKYCT FKCQIDHWRK GHKDECHPRN LGARQDGAPE NVVTRVEVKD MPPDKPSNTA
EVPAEYSQFT GKAESVDCSR LTTSSNAAKV HDTAVCEKIY LTTPDQHIEL ESELEQSNKQ
ALGADNHESS RNSPCMSAVD KVSSAHSSAY CLSHNPSKRG DNSHGLCARS ESSGVMPNNP
STEKKYARQQ TAIKVVRHYA TELALFPYKH FIELYNFEKL ELHPFGLCNL GNSCYANAVL
QCLAFTRPLT AYLLEGYHSR NCSKMEWCFM CELEKVMTEG KCGKAPVSPT GILSHLNEIG
TSFGQGREED AHEFLRYAID TMQSASVKEA KKNGVHKLAE ESTLVQLIFG GYLQSKIICT
KCQVSSAQSE RILDLTVEID GDINTLEGAL RRFTSSEVLD GDNRYHCSRC MSYERAKKKL
MISEAPNILT IALKRYQSGV YGKISKDVKF PEHLNLSQFM CETDDYSPVY SLYAVVVHHD
VMNTTISGHY VCYVKDPQGK WHEMDDSKVK PVSLKKVLSK CAYMLLYARC SPRVPDSVRK
AMINQGASHA KKPKKMADSE STPLGGGNYV SMHQGGNLCK DRAVHHLTYT SEASDGWSYP
IPGFSRSDSS SLFSNSDAGS SSTLSSDSTN STRNLASMEY DYIFGASDHM HPVSPAVIPE
EDELSYLRQR SSFNPCSSGH YMDQGGEFAQ QYYHRLQVGG GVLEEGGEKP SFYTDQGKQN
SSSNRNRSFS RSCKITEQRR YTGTGAAFFL EGRGLSKHFT GRGGLGL
//