ID A0A368QKL2_SETIT Unreviewed; 1036 AA.
AC A0A368QKL2;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SETIT_3G307200v2 {ECO:0000313|EMBL:RCV18517.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV18517.1};
RN [1] {ECO:0000313|EMBL:RCV18517.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV18517.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV18517.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV18517.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM003530; RCV18517.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A368QKL2; -.
DR STRING; 4555.A0A368QKL2; -.
DR GO; GO:0140993; F:histone modifying activity; IEA:UniProt.
DR GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR10694:SF50; JMJC DOMAIN CONTAINING PROTEIN, EXPRESSED; 1.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SMART; SM00355; ZnF_C2H2; 4.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 2.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 18..59
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 189..358
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT DOMAIN 940..969
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 970..999
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 1000..1031
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 653..674
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 774..847
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 882..909
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 782..810
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1036 AA; 114194 MW; 0886D964B6544058 CRC64;
MSPPAVETPE WLRNLPVAPE YHPTAAEFVD PIAYILKIEA EASRYGICKI VPPLAPPPRE
ATVERLKASF AANAAAAAGV DGAAPAPTFP TRLQQVGFST KNRRPASRRV WESGERYTLE
AFRAKARDIE LPRHAVPPKH ATQLQLEALF WGACAARPFN VEYGNDMPGS GFAAPKEGGG
GNAALAARDV GETEWNMRLA PRARGSLLRA MGRDVAGVTT PMLYVAMLYS WFAWHVEDHE
LHSLNYLHFG KPKTWYGVPR DAMLAFEDAV RVHGYADDLN AIMAFQTLNE KTTVLSPEVL
LSAGVPCCRL VQNPGEFIIT FPGAYHSGFS HGFNCGEATN IATPRWLQVA KEAAIRRAST
NCGPLVSHYQ LLYELALSLR PRELKDSHGV PRSSRLRDKK KNEGEIMIKE TFVGSVIENN
NFLSILLDKS SCVIIPEIKF PLPSFPTSMA PEVTVKQGLI AGTCSISQKK AEDMLAYGNA
IDEIKGFEKM SESQSSSATT SSACNGRKLY ETKFGMVNSS ALLLNSEIQS GVIEKGGSHQ
GCGLLDQGRL PCVQCGILSY ACVAIIQPKE AAVQYVISQE CMSSSAKHGE IMKSNDTSNW
ITTVPPQGHS SETDDNRIHN MSSARVSDRC RQLYTSSTHG CASALGLLAS AYESSDSDEE
AEAPDNISNN SANNDAVNGI TNIQSSGTSV QYQNTNLHLY EEGCDSRATV SPMKPVENMS
IAMTQASIET DMTHLADLGE SLTAYDQCKK KSSKCKASDD LSNVEKRLQK MVKKVSTKKH
KNDKTNRQFQ EKHSKDNNVD LLHEDNGDEA TQENWDGVQQ KTNDVKVKSR GKMHSGKKKA
SKCQTSDGLH NGDNEAKFSC DTDVCHRDKA TIDKWEEIPK EKADDVKVKS KMQSGKKKAS
KHPASDGLRN GDKGAKFSCD IEGCDMSFST QQDLALHKRD ICPVKGCKKK FFCHKYLLQH
RKVHLDERPL MCSFTGCKKT FKWPWARTEH MRVHTGVRPY ACTEPGCTQT FRFVSDFSRH
KRKTGHSCDK KKKNST
//
