ID A0A368R712_SETIT Unreviewed; 1080 AA.
AC A0A368R712;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=PHD-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SETIT_5G198600v2 {ECO:0000313|EMBL:RCV25848.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV25848.1};
RN [1] {ECO:0000313|EMBL:RCV25848.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV25848.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV25848.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV25848.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM003532; RCV25848.1; -; Genomic_DNA.
DR RefSeq; XP_004968957.1; XM_004968900.2.
DR AlphaFoldDB; A0A368R712; -.
DR GeneID; 101782573; -.
DR OrthoDB; 395910at2759; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15489; PHD_SF; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46951; BED-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46951:SF3; BED-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00249; PHD; 3.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 3.
DR PROSITE; PS50808; ZF_BED; 1.
DR PROSITE; PS50016; ZF_PHD_2; 3.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 68..119
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT DOMAIN 816..866
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 925..983
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 928..980
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 979..1029
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 1..59
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 230..258
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1080 AA; 120982 MW; 9D48C4E719AD0B10 CRC64;
MMDGEGSQGI KKVHFRDSSS QVPLITYKRR RRQKPQQAEP QQQAEPQLET EPEQKAGDVP
AQQVPILRAR DIGWEHAVDL DGNKRRWQCK FCSLCRSGGV TTFKAHLIDD SCPNVPKEIS
KKVSNFIEEK RATRLLLNNY IFSVDEDEFF DTQVQGDRTA EYENDQQPSR NATLFLTLDE
CANEMAAGSS QCGEESSGQP VEHCDQPEEQ WPLDHGSMDQ VINNKNKILD KNTDNSQNTK
MAAGSSQCGE ESSGQPVEHF NQPEEQWAMD HGRTDQVINN KNKILDKNTD NSQKSKILKP
RRKSAFNTRK HIIIVDEVAR HWRCRYCGMD GYGKKFQLHY HLAGAFRHPK CPNVPREVFA
KARHHVPTKR RLKTNKAEQQ IPSRPHILGQ FGEERQNNGA SCGNQSELSI KNESSEVHNY
PVRIQGSAWE HSLIYEKEKG NWKCKWCSVE GCHGVTRLKW HLVGWKNLPQ CPDVPKDVAK
KIRDQMMSKE KKKARRSGSF VGNGSCDALC SPKSSQLDQD HLTTTMHDRC SSLAVDQANS
ESMACQMLSN TTLLSQESAN PQVSHEQQGK ELATPPECCP IQPIMEVPVG NGLCGDTNNS
EEQRSDSRTN GWWRYVLDGL MRLHMPGIQG DAGIATCVRD ALLYGCAEFG TVAGKVEMDS
DKTVTANTAK CQNVLMNILR SENFAVLCSV LCRTVHQDEG RTRYFDFDVI DLRMKNGSYG
HKPELFLHDL KLLWENLKVA GQNIILLANN LSNLTEDSYE KLVGRARLSS DGEPNGAVVT
ISEPQSLVQS DALVPSTSQG FNQLDQPGPS YLSDVHNNCN QCGKEARGGS ILKCSRCMVS
CHISCIEPPN PSISTGSWCC KNCSATCIEP VEDDNSLHGN CVVCDRLEVC RSPKCEDAPN
DDSRAMVISS VSSVGDPELP EVDTGGSCKI CGDPEEDDKR FLICGHIHCL YKYYHIRCLK
SKQIAGDVQQ DKPCWYCPSC LCRVCLSDKD DDLTILCDSC DEAYHLYCIT PRRTSIPKGR
WYCSSCSVAR AKEGMRQYER TLKLHQKDNA GQQSRNYEGL DLLVSAVEQL SADELLVTPN
//