ID A0A370EB70_9FLAO Unreviewed; 454 AA.
AC A0A370EB70;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 27-MAR-2024, entry version 13.
DE SubName: Full=DNA polymerase-3 subunit epsilon {ECO:0000313|EMBL:RDI04427.1};
GN ORFNames=DEU42_1229 {ECO:0000313|EMBL:RDI04427.1};
OS Flavobacterium sp. AG291.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=2184000 {ECO:0000313|EMBL:RDI04427.1, ECO:0000313|Proteomes:UP000254305};
RN [1] {ECO:0000313|EMBL:RDI04427.1, ECO:0000313|Proteomes:UP000254305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AG291 {ECO:0000313|EMBL:RDI04427.1,
RC ECO:0000313|Proteomes:UP000254305};
RA Venturi V.;
RT "Genome sequencing of rice bacterial endophytes.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RDI04427.1}.
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DR EMBL; QQAR01000022; RDI04427.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A370EB70; -.
DR OrthoDB; 9803913at2; -.
DR Proteomes; UP000254305; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProt.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR CDD; cd10434; GIY-YIG_UvrC_Cho; 1.
DR Gene3D; 3.40.1440.10; GIY-YIG endonuclease; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR047296; GIY-YIG_UvrC_Cho.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF82771; GIY-YIG endonuclease; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000254305}.
FT DOMAIN 195..271
FT /note="GIY-YIG"
FT /evidence="ECO:0000259|PROSITE:PS50164"
SQ SEQUENCE 454 AA; 51997 MW; C6E07427EE2ADF6B CRC64;
MYAILDIETT GGQYNEEGIT EIAIYKFDGH EIVDQFISLV NPEKPIQPFV VKLTGINNAM
LRSAPKFYEV AKRIIEITEG CIIVAHNAQF DYRVLRTEFR NLGYNFEKQT LCTVELSQKL
LPEQKSHSLG KLVRALGIPM SDRHRATGDA MATVQLFKLL LAKDTEKEIL TSLIKTEQKK
GISPKLLDLV DGIPSVTGLY YIYNEKGDII YLGKSKNIKK RVNQHFTSVA RKSKKIQREA
FSVQYEETGS ELIALLKECQ EIKVNKPVYN RALKKTVFPW SLYAEKDSHG YLCLKIQKTD
NRKKEVVSFP GIVEARTALF AIVEKYNLCQ KINEISSSEK EHCFPYELSN CNGACLGHET
PETYNERVLE FINNNSFHNQ SMIIIDRGRA VDERSAVLIE NGIYKGYAFY NLNYQITNIN
ILKNILTPMD NNKDVKKIIQ DYIRKKKGLK IVRL
//
