ID A0A370H172_9NOCA Unreviewed; 710 AA.
AC A0A370H172;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Glycogen operon protein {ECO:0000313|EMBL:RDI49775.1};
GN ORFNames=DFR68_106212 {ECO:0000313|EMBL:RDI49775.1};
OS Nocardia mexicana.
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae;
OC Nocardia.
OX NCBI_TaxID=279262 {ECO:0000313|EMBL:RDI49775.1, ECO:0000313|Proteomes:UP000255355};
RN [1] {ECO:0000313|EMBL:RDI49775.1, ECO:0000313|Proteomes:UP000255355}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 44952 {ECO:0000313|EMBL:RDI49775.1,
RC ECO:0000313|Proteomes:UP000255355};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC {ECO:0000256|ARBA:ARBA00008061}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RDI49775.1}.
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DR EMBL; QQAZ01000006; RDI49775.1; -; Genomic_DNA.
DR RefSeq; WP_068018041.1; NZ_QQAZ01000006.1.
DR AlphaFoldDB; A0A370H172; -.
DR STRING; 1210089.GCA_001613165_02378; -.
DR OrthoDB; 3236218at2; -.
DR Proteomes; UP000255355; Unassembled WGS sequence.
DR GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR011837; Glycogen_debranch_GlgX.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR NCBIfam; TIGR02100; glgX_debranch; 1.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF1; ISOAMYLASE 1, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 2.
DR Pfam; PF02922; CBM_48; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000255355}.
FT DOMAIN 173..571
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 467..496
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 467..481
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 710 AA; 79266 MW; CFCC76CF140D8020 CRC64;
MVSPNPLGDV APLGVWPGTA YPLGATYDGA GTNFSVFSEV AERVELCLID RAGAETRIRL
EEVDGYVWHA YVPTVAPGRR YGFRVHGPYE PELGLRCDPS KLLLDPYGKA FAGEFGNDPS
LHTRGRDSLG HTMTGVVINP FFDWADDRAP RRPYHETVLY EAHVKGMTMT HPQVPPELRG
TYAGLAHPAI IEHLKALGVT AIELMPVHQF LHDRPLLDRG LRNYWGYNSF GYLAPHHEYA
ADPRAGAAVT EFKAMVRALH AEGIEVILDV VYNHTGEGNH LGPTISLRGI DNAAYYRLLE
DDPAHYMDYT GTGNSLNVRH PHTLQLIMDS LRYWILEMHV DGFRFDLAAT LARELHDVDR
LSTFFDLVQQ DPVVSQVKLI AEPWDVGEGG YQVGNFPSLW TEWNGKYRDT VRDYWRGEPA
TLGEFASRLT GSSDLYEATG RRPGASINFV TAHDGFTLRD LVSYNDKHNE DNGEDNRDGE
SYNRSWNCGV EGPTDDPEVL ELRERQSRNM IATLALSQGT PMLLHGDEFG RTQHGNNNAY
CQDSELSWMD WSLAHKNSEL LEFTRNAVGL RARHPVFRRR RFLDGRPAPD HDRPGDIAWL
TPAGVEMTAA DWETGFARSL AVFLDGEGIA EPGPRGERIR DDSFLLCFNA HDAPIDFTVP
GPDHGTEWSI ALDCSAPTGL TRAEYPAAGT VGVPTRCLLV LRRPARSTWK
//