ID A0A370I9L6_9NOCA Unreviewed; 345 AA.
AC A0A370I9L6;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=MerR-like DNA binding protein {ECO:0000313|EMBL:RDI67416.1};
GN ORFNames=DFR76_103487 {ECO:0000313|EMBL:RDI67416.1};
OS Nocardia pseudobrasiliensis.
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae;
OC Nocardia.
OX NCBI_TaxID=45979 {ECO:0000313|EMBL:RDI67416.1, ECO:0000313|Proteomes:UP000254869};
RN [1] {ECO:0000313|EMBL:RDI67416.1, ECO:0000313|Proteomes:UP000254869}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 44290 {ECO:0000313|EMBL:RDI67416.1,
RC ECO:0000313|Proteomes:UP000254869};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the beta sliding clamp family.
CC {ECO:0000256|ARBA:ARBA00010752}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RDI67416.1}.
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DR EMBL; QQBC01000003; RDI67416.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A370I9L6; -.
DR STRING; 1210086.GCA_001613105_04397; -.
DR Proteomes; UP000254869; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00140; beta_clamp; 1.
DR Gene3D; 1.10.1660.10; -; 1.
DR Gene3D; 3.10.150.10; DNA Polymerase III, subunit A, domain 2; 1.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR046938; DNA_clamp_sf.
DR InterPro; IPR001001; DNA_polIII_beta.
DR InterPro; IPR022637; DNA_polIII_beta_cen.
DR InterPro; IPR000551; MerR-type_HTH_dom.
DR PANTHER; PTHR30478:SF0; BETA SLIDING CLAMP; 1.
DR PANTHER; PTHR30478; DNA POLYMERASE III SUBUNIT BETA; 1.
DR Pfam; PF02767; DNA_pol3_beta_2; 1.
DR Pfam; PF13411; MerR_1; 1.
DR SMART; SM00422; HTH_MERR; 1.
DR SMART; SM00480; POL3Bc; 1.
DR SUPFAM; SSF55979; DNA clamp; 1.
DR SUPFAM; SSF46955; Putative DNA-binding domain; 1.
DR PROSITE; PS00552; HTH_MERR_1; 1.
DR PROSITE; PS50937; HTH_MERR_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW DNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022932};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000254869};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 8..78
FT /note="HTH merR-type"
FT /evidence="ECO:0000259|PROSITE:PS50937"
SQ SEQUENCE 345 AA; 36879 MW; 51470E96A97B1B08 CRC64;
MLGAMEGFYG IGRLARMSGL TISALRFYDG AGVLTPAVID PNTGYRWYSG DQVVIAQLIC
RLRRTRMPLP DIKQIVASRH MPERVDVLLA AHLERLEQGL ADARRQLSDI HSLLNTKESP
MTTTLTFTGS DFRTALAAVR FAVSTDPALP ALGGVLLDTI AGTVNLVATD RYRLAVAPAP
ADVEGPACAA AVPAAFLDSI AATEAARVVL TIEGDTVTAR AGGLTCTATV IDEVFPDYRR
LMPSEDAEGV RIGGRLRHAI VNGPSLTQRR DADGIEFETV VLSTDDRGDI VISDGTEGIA
VNREFILEAM DAAGEGQLHL RLDGPITPLI IHSARSTSLL MPVRL
//
