ID A0A370Q602_9FLAO Unreviewed; 535 AA.
AC A0A370Q602;
DT 07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT 07-NOV-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=Tetratricopeptide repeat protein {ECO:0000313|EMBL:RDK83795.1};
GN ORFNames=C8D94_1068 {ECO:0000313|EMBL:RDK83795.1};
OS Marinirhabdus gelatinilytica.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae.
OX NCBI_TaxID=1703343 {ECO:0000313|EMBL:RDK83795.1, ECO:0000313|Proteomes:UP000255317};
RN [1] {ECO:0000313|EMBL:RDK83795.1, ECO:0000313|Proteomes:UP000255317}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 101478 {ECO:0000313|EMBL:RDK83795.1,
RC ECO:0000313|Proteomes:UP000255317};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the Rap family. {ECO:0000256|ARBA:ARBA00038253}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RDK83795.1}.
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DR EMBL; QRAO01000006; RDK83795.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A370Q602; -.
DR OrthoDB; 1523128at2; -.
DR Proteomes; UP000255317; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR46630; TETRATRICOPEPTIDE REPEAT PROTEIN 29; 1.
DR PANTHER; PTHR46630:SF1; TETRATRICOPEPTIDE REPEAT PROTEIN 29; 1.
DR Pfam; PF17874; TPR_MalT; 1.
DR SMART; SM00421; HTH_LUXR; 1.
DR SMART; SM00028; TPR; 4.
DR SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000255317};
KW Signal {ECO:0000256|SAM:SignalP};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..17
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 18..535
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5016794640"
FT TRANSMEM 346..364
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 195..228
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 473..531
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|SMART:SM00421"
SQ SEQUENCE 535 AA; 61290 MW; 0EA41C942F6C29A1 CRC64;
MRFCLLLLLG CFQVSQAQDE VSVLIDSLAG ASSPVEKTHL SLSIAEQLQH SNWSRAIHFL
DVAKETATTS NSDSLLAEVN MVAGDMYSNK DALDIALENY LKAYDYYEDK KPSERFRLEN
NLAIVYARSN NEESALTYFD KVYQYQLAQK DSLVLAQILN NMGNLYLGKN ADSALTYFEK
AEQLAAKINN PDLSIYVQTN LGRSYLKKNE MNKARASFQK ALNTLSKTTN VRTVSFLNNE
MAQFYAENKQ LDSALLYAKK VVAANDTLAP FSFEQQDAVE LVYKSLLEKG AYKEASTYFE
KFNQIRDSLA LEDKLVNVER VIIEEKYRNK DKIRELEEGK QRARNYMILL ALLVALVILG
ALLLRYRAKL KNTILEKQLA TAKQKELNTQ LQLKNKELVG KAMIELHRTE IIEEILTDLK
SVRLKAAKRE TQNAIDYVVK RLKRDTNTNL WEEFELRFEQ VHESFYKNLI TKHPDLTPKD
KRLCALLKLN LTSKEIAQIT GQTAKSVENA RTRLRKKLDI THSETDLSAY LFSFD
//
