ID   A0A370QLI1_9FLAO        Unreviewed;       174 AA.
AC   A0A370QLI1;
DT   07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT   07-NOV-2018, sequence version 1.
DT   24-JAN-2024, entry version 13.
DE   RecName: Full=Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014};
GN   Name=rimM {ECO:0000256|HAMAP-Rule:MF_00014};
GN   ORFNames=C8D94_101737 {ECO:0000313|EMBL:RDK88860.1};
OS   Marinirhabdus gelatinilytica.
OC   Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae.
OX   NCBI_TaxID=1703343 {ECO:0000313|EMBL:RDK88860.1, ECO:0000313|Proteomes:UP000255317};
RN   [1] {ECO:0000313|EMBL:RDK88860.1, ECO:0000313|Proteomes:UP000255317}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 101478 {ECO:0000313|EMBL:RDK88860.1,
RC   ECO:0000313|Proteomes:UP000255317};
RA   Goeker M.;
RT   "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT   most valuable type-strain genomes for metagenomic binning, comparative
RT   biology and taxonomic classification.";
RL   Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: An accessory protein needed during the final step in the
CC       assembly of 30S ribosomal subunit, possibly for assembly of the head
CC       region. Essential for efficient processing of 16S rRNA. May be needed
CC       both before and after RbfA during the maturation of 16S rRNA. It has
CC       affinity for free ribosomal 30S subunits but not for 70S ribosomes.
CC       {ECO:0000256|HAMAP-Rule:MF_00014}.
CC   -!- SUBUNIT: Binds ribosomal protein uS19. {ECO:0000256|HAMAP-
CC       Rule:MF_00014}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00014}.
CC   -!- DOMAIN: The PRC barrel domain binds ribosomal protein uS19.
CC       {ECO:0000256|HAMAP-Rule:MF_00014}.
CC   -!- SIMILARITY: Belongs to the RimM family. {ECO:0000256|HAMAP-
CC       Rule:MF_00014}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RDK88860.1}.
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DR   EMBL; QRAO01000001; RDK88860.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A370QLI1; -.
DR   OrthoDB; 9810331at2; -.
DR   Proteomes; UP000255317; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005840; C:ribosome; IEA:InterPro.
DR   GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR   GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR   GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-UniRule.
DR   Gene3D; 2.30.30.240; PRC-barrel domain; 1.
DR   Gene3D; 2.40.30.60; RimM; 1.
DR   HAMAP; MF_00014; Ribosome_mat_RimM; 1.
DR   InterPro; IPR027275; PRC-brl_dom.
DR   InterPro; IPR011033; PRC_barrel-like_sf.
DR   InterPro; IPR011961; RimM.
DR   InterPro; IPR002676; RimM_N.
DR   InterPro; IPR036976; RimM_N_sf.
DR   InterPro; IPR009000; Transl_B-barrel_sf.
DR   NCBIfam; TIGR02273; 16S_RimM; 1.
DR   PANTHER; PTHR33692; RIBOSOME MATURATION FACTOR RIMM; 1.
DR   PANTHER; PTHR33692:SF1; RIBOSOME MATURATION FACTOR RIMM; 1.
DR   Pfam; PF05239; PRC; 1.
DR   Pfam; PF01782; RimM; 1.
DR   SUPFAM; SSF50346; PRC-barrel domain; 1.
DR   SUPFAM; SSF50447; Translation proteins; 1.
PE   3: Inferred from homology;
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|HAMAP-Rule:MF_00014};
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_00014};
KW   Reference proteome {ECO:0000313|Proteomes:UP000255317};
KW   Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517, ECO:0000256|HAMAP-
KW   Rule:MF_00014};
KW   rRNA processing {ECO:0000256|ARBA:ARBA00022552, ECO:0000256|HAMAP-
KW   Rule:MF_00014}.
FT   DOMAIN          9..88
FT                   /note="RimM N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF01782"
FT   DOMAIN          98..169
FT                   /note="PRC-barrel"
FT                   /evidence="ECO:0000259|Pfam:PF05239"
SQ   SEQUENCE   174 AA;  20078 MW;  FF80145F0DFA3FB1 CRC64;
     MQKKDCFFVG KIVKKYSFKG ELLVKLDTDD PEQFLEMESV LVEQHKNLVP FFIEQLSLHK
     STLLRVKFEE VENEADADAL LGKELYLPLA MLPKLTGNKF YYHEIIGFEV MDTTHGAIGT
     IVGVNDSTPQ HLFEIEFEQK EILIPINDEI IQKVDRENRT LHLQAPNGLI DLYI
//