ID   A0A379C816_9PAST        Unreviewed;       778 AA.
AC   A0A379C816;
DT   07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT   07-NOV-2018, sequence version 1.
DT   24-JAN-2024, entry version 14.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000256|HAMAP-Rule:MF_01411,
GN   ECO:0000313|EMBL:SUB58522.1};
GN   ORFNames=NCTC12872_00485 {ECO:0000313|EMBL:SUB58522.1};
OS   Phocoenobacter uteri.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
OC   Pasteurellaceae; Phocoenobacter.
OX   NCBI_TaxID=146806 {ECO:0000313|EMBL:SUB58522.1, ECO:0000313|Proteomes:UP000255417};
RN   [1] {ECO:0000313|EMBL:SUB58522.1, ECO:0000313|Proteomes:UP000255417}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NCTC12872 {ECO:0000313|EMBL:SUB58522.1,
RC   ECO:0000313|Proteomes:UP000255417};
RG   Pathogen Informatics;
RA   Doyle S.;
RL   Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000256|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|HAMAP-Rule:MF_01411}.
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DR   EMBL; UGTA01000001; SUB58522.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A379C816; -.
DR   Proteomes; UP000255417; Unassembled WGS sequence.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   Gene3D; 2.60.450.10; Lipopolysaccharide (LPS) transport protein A like domain; 1.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   InterPro; IPR005653; OstA-like_N.
DR   PANTHER; PTHR30189; LPS-ASSEMBLY PROTEIN; 1.
DR   PANTHER; PTHR30189:SF1; LPS-ASSEMBLY PROTEIN LPTD; 1.
DR   Pfam; PF04453; LptD; 1.
DR   Pfam; PF03968; LptD_N; 1.
DR   PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane {ECO:0000256|ARBA:ARBA00023237, ECO:0000256|HAMAP-
KW   Rule:MF_01411};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_01411};
KW   Reference proteome {ECO:0000313|Proteomes:UP000255417};
KW   Signal {ECO:0000256|HAMAP-Rule:MF_01411}.
FT   SIGNAL          1..25
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01411"
FT   CHAIN           26..778
FT                   /note="LPS-assembly protein LptD"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01411"
FT                   /id="PRO_5017090624"
FT   DOMAIN          53..187
FT                   /note="Organic solvent tolerance-like N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03968"
FT   DOMAIN          298..684
FT                   /note="LptD C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF04453"
SQ   SEQUENCE   778 AA;  90309 MW;  C1D00ACB2547FC3A CRC64;
     MMKDYRYTLL SLAIMTACAS QYANADLKTQ CRLGIPHFSG QIEQGEPETL PVYIEADKAT
     ITELKEAVYS GSVLIKQGNR TINTQQFTVS QNPQNNRFAT LNNSFKYQDN YIRATGKKAS
     IDLAGRKADL SNVDYQLVDK QGRGSAETIL LRDQVRRLKN ATYTACLPSD NAWQIDASEM
     TQYIDKEYAE MWHARLKVGD VPIFYTPYLQ IPLGDRRRTG LLMPNYSHST KTGFTFHIPF
     YLNIAPNMDA TITPTYYSRR GWQISPEFRY LTQLGQGTIA GEYMKKDRYE DWADKNQSRH
     LFYWKHNASF LSDWRLSLDY TKVSDKQYLS HFDSSYGDST DGYVTQNVKF SYHQPNYNLS
     IAGKKFQIFD TKNGAKPYRA LPQIEFNYYK NNIWKNADFS LFSQLTHFDN DSKEMPTAWR
     LHIEPKLNLP LSNNYGSVNF ETKLYATQYW QKAGKEQKDK IKSHVTRVLP QFKVNFQTVL
     ESDTQLISDF IQTLEPQIQY LYRPYKNQYD IGTTQYHSLG LGYDSMLRQQ DYFSLFSDRR
     YSGLDRIASA NQITIGATTR FMKETTGQEY FNLSLGQIYY LSNSRIDDSS PNSNTDRSTS
     WALETNWRFN KNWNLNGSYQ YDTRLDETSL ANLALQYKPQ NDKVVQFNYR YASQHYIDQN
     LRSNQYGQDI KQLGVVLGWN INDNLSIMTS HYQDLALDKY VESQLGLTYN TCCWKATSYI
     SRHLIPTPNG ERDDPTDVYY DNSIGVNFEL RFGSGYNTGV SKMLKKGLIP YTEEFDIN
//