ID   A0A388K650_CHABU        Unreviewed;      1109 AA.
AC   A0A388K650;
DT   05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 1.
DT   27-MAR-2024, entry version 15.
DE   RecName: Full=Reverse transcriptase domain-containing protein {ECO:0000259|PROSITE:PS50878};
GN   ORFNames=CBR_g51091 {ECO:0000313|EMBL:GBG65496.1};
OS   Chara braunii (Braun's stonewort).
OC   Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales; Characeae;
OC   Chara.
OX   NCBI_TaxID=69332 {ECO:0000313|EMBL:GBG65496.1, ECO:0000313|Proteomes:UP000265515};
RN   [1] {ECO:0000313|EMBL:GBG65496.1, ECO:0000313|Proteomes:UP000265515}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S276 {ECO:0000313|EMBL:GBG65496.1,
RC   ECO:0000313|Proteomes:UP000265515};
RX   PubMed=30007417; DOI=10.1016/j.cell.2018.06.033;
RA   Nishiyama T., Sakayama H., Vries J.D., Buschmann H., Saint-Marcoux D.,
RA   Ullrich K.K., Haas F.B., Vanderstraeten L., Becker D., Lang D.,
RA   Vosolsobe S., Rombauts S., Wilhelmsson P.K.I., Janitza P., Kern R.,
RA   Heyl A., Rumpler F., Villalobos L.I.A.C., Clay J.M., Skokan R., Toyoda A.,
RA   Suzuki Y., Kagoshima H., Schijlen E., Tajeshwar N., Catarino B.,
RA   Hetherington A.J., Saltykova A., Bonnot C., Breuninger H., Symeonidi A.,
RA   Radhakrishnan G.V., Van Nieuwerburgh F., Deforce D., Chang C., Karol K.G.,
RA   Hedrich R., Ulvskov P., Glockner G., Delwiche C.F., Petrasek J.,
RA   Van de Peer Y., Friml J., Beilby M., Dolan L., Kohara Y., Sugano S.,
RA   Fujiyama A., Delaux P.-M., Quint M., TheiBen G., Hagemann M., Harholt J.,
RA   Dunand C., Zachgo S., Langdale J., Maumus F., Straeten D.V.D., Gould S.B.,
RA   Rensing S.A.;
RT   "The Chara Genome: Secondary Complexity and Implications for Plant
RT   Terrestrialization.";
RL   Cell 174:448-464(2018).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:GBG65496.1}.
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DR   EMBL; BFEA01000062; GBG65496.1; -; Genomic_DNA.
DR   EnsemblPlants; GBG65496; GBG65496; CBR_g51091.
DR   Gramene; GBG65496; GBG65496; CBR_g51091.
DR   Proteomes; UP000265515; Unassembled WGS sequence.
DR   CDD; cd01647; RT_LTR; 2.
DR   Gene3D; 3.30.70.270; -; 2.
DR   Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 2.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR000477; RT_dom.
DR   PANTHER; PTHR24559:SF437; RIBONUCLEASE H; 1.
DR   PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR   Pfam; PF00078; RVT_1; 2.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 2.
DR   PROSITE; PS50878; RT_POL; 2.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000265515}.
FT   DOMAIN          17..196
FT                   /note="Reverse transcriptase"
FT                   /evidence="ECO:0000259|PROSITE:PS50878"
FT   DOMAIN          883..1062
FT                   /note="Reverse transcriptase"
FT                   /evidence="ECO:0000259|PROSITE:PS50878"
FT   REGION          751..770
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1066..1100
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   UNSURE          389
FT                   /note="D or N"
FT                   /evidence="ECO:0000313|EMBL:GBG65496.1"
SQ   SEQUENCE   1109 AA;  125578 MW;  A72290BFAE160E97 CRC64;
     MSEEELEVLR AQLNDLLDKG WIRPSCSPYG APVLFVRKKN KDLRLCIDYR KLNTQTVKNA
     GPLPRIDDLL ERLGGATYFS KLDLKSGYHQ IEIXPQDRYK TTFKTRYGHF EWVVMPFGLT
     NAPAIFQAAI TTEFHDLLDR SVLIYLDDIL VYSRTVDEHI VHLRVVLKHL RLAKYKANLD
     KCQFAKQELE YLGHFITPKG IRPLADKIQA IVDWPEPRSF DYCSQGQGSE SACSSILDQD
     RANLCEFKAM CIPSKCDQND DCCRMNYEDD CRDTAFACDW IEQCTPIVDM CRLKNAKEDC
     RRLYGCVWVA ATSSCYNAKA ERQRLANEAA AQAQRTVEAD TVVREKRNAI SIESLTVNES
     QWTTLLQGML FVPSDTQADP TPAEEERSDL ANLMLNMMRA VMWNNTMLMV QIHEGRQLRQ
     IQQNDSAALT XAVXAAATHQ QQQQQLLSTT TARVNSIEAK ASAAPGCTTD TAKQLNERID
     HVVSLIGKLS DFTGPATISS TVAAIKTDIT KLQSQPAAAA KVYKMPRFNI GKFEDYNKTD
     ALTWWQAFLT EASCHKVPTE DMMKAIYFQL IGGAQAWMNH LAVNKKTTIA ELHKHLTWEE
     FEQLWFTRFM VRNVVKAAMN EVYTCSQGSM PTRDKTIKWQ KIVTTPGFDL SFTNQRSEFF
     SRSCAGLRTA LGNEYDYASF QPILDRANLV IQTDDKAANE RQSQPHYVAK QGYQRPTHNN
     AVISEETVDL HAAAASSNDG GIVAALPPKR PKRVRKNKAT QETTSTGTGQ QPWTAYKITK
     EIYDLRQRIR DAIARNDVEE MGLVFLHALP LPDGPVTSPP DPRITHLLDE YGDVFEAPTG
     TVPDRPIRHG ITLEAGAVPP RGCIYRMSEK ELEVLRAQLD DLLDKGWIRP SCSPYGAPVL
     FVRKKNKDLR LCIDYLKLNA QTVKNAGPLP RIDDLLERLG GATYFSKLDL KSGYHHIEIQ
     PQDRYKTAFK TRYWHFEWVV MPFGLTNAPT TFQAAMITEF RDLLDRSILI YLDDILVYSR
     TLDEHITHLH AVLYRLRLAK CKANRDKCEF AKQELEYLGH YVTPKRHSSL SGQDPSHRGL
     AGTPLHDEYS APSSAPQVPK GVQSVLHPC
//