ID A0A388K706_CHABU Unreviewed; 662 AA.
AC A0A388K706;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 13.
DE RecName: Full=Reverse transcriptase domain-containing protein {ECO:0000259|PROSITE:PS50878};
GN ORFNames=CBR_g53804 {ECO:0000313|EMBL:GBG65832.1};
OS Chara braunii (Braun's stonewort).
OC Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales; Characeae;
OC Chara.
OX NCBI_TaxID=69332 {ECO:0000313|EMBL:GBG65832.1, ECO:0000313|Proteomes:UP000265515};
RN [1] {ECO:0000313|EMBL:GBG65832.1, ECO:0000313|Proteomes:UP000265515}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S276 {ECO:0000313|EMBL:GBG65832.1,
RC ECO:0000313|Proteomes:UP000265515};
RX PubMed=30007417; DOI=10.1016/j.cell.2018.06.033;
RA Nishiyama T., Sakayama H., Vries J.D., Buschmann H., Saint-Marcoux D.,
RA Ullrich K.K., Haas F.B., Vanderstraeten L., Becker D., Lang D.,
RA Vosolsobe S., Rombauts S., Wilhelmsson P.K.I., Janitza P., Kern R.,
RA Heyl A., Rumpler F., Villalobos L.I.A.C., Clay J.M., Skokan R., Toyoda A.,
RA Suzuki Y., Kagoshima H., Schijlen E., Tajeshwar N., Catarino B.,
RA Hetherington A.J., Saltykova A., Bonnot C., Breuninger H., Symeonidi A.,
RA Radhakrishnan G.V., Van Nieuwerburgh F., Deforce D., Chang C., Karol K.G.,
RA Hedrich R., Ulvskov P., Glockner G., Delwiche C.F., Petrasek J.,
RA Van de Peer Y., Friml J., Beilby M., Dolan L., Kohara Y., Sugano S.,
RA Fujiyama A., Delaux P.-M., Quint M., TheiBen G., Hagemann M., Harholt J.,
RA Dunand C., Zachgo S., Langdale J., Maumus F., Straeten D.V.D., Gould S.B.,
RA Rensing S.A.;
RT "The Chara Genome: Secondary Complexity and Implications for Plant
RT Terrestrialization.";
RL Cell 174:448-464(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GBG65832.1}.
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DR EMBL; BFEA01000066; GBG65832.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A388K706; -.
DR EnsemblPlants; GBG65832; GBG65832; CBR_g53804.
DR Gramene; GBG65832; GBG65832; CBR_g53804.
DR OMA; SKCIDEC; -.
DR Proteomes; UP000265515; Unassembled WGS sequence.
DR CDD; cd09274; RNase_HI_RT_Ty3; 2.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 3.30.70.270; -; 4.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR33064; POL PROTEIN; 1.
DR Pfam; PF17919; RT_RNaseH_2; 2.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 2.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000265515}.
FT DOMAIN 25..204
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
SQ SEQUENCE 662 AA; 76976 MW; B5E959E6E8DDA1EE CRC64;
MPRGRIYRLS PAELDELRRQ LKELTEKGWI RPSTSPYGAP VLFVPKKGGP LRMCIDYRGL
NAITVKNVEP LPRIADLLDR VQGCRYFTKI DLKSGYHQIA VRPEDQHKTA FQTRYGLYEF
VVMPFGLCNA PGTFQHAMNR IFHDYLDKFI VVYLDYILIS SRTVEEHAEH LKTVLGLLRQ
HQYKVNLDKR EFGRTKILYL GHEISADGLR PKDAKVASIR DWPRPQTVTE VRSFLGMTGY
YRPFVKNYST IASPLTDLTR LDAPWEWTEE CEASFKKLKY ALTHYEVLKL PDPDKPFVVT
TDASQYGIGA VLAQQEGPKL RPIEYMSKKM SSQKLAKSTY ERELNALYRA LVHWRHYLLG
RFFNVRSDHE TLRWIKTQPV LSDALKRWIQ VIDMYDYQLD PIKEIVLSLL RQHKYKINSE
KCEFGSAKIL SLGHEIFADR IRLEDAKVAS IRDRPQPRIV IEVGSFLGMC GYYRNFVKNY
STVASPVTDL TRLDTPSKCI DECEAAFKQL KHALTHHEVL MVPDPERPFF VTTDASQYGI
GAVLAQQEGK KLRPVKYMSK KMPSKKLAKS TYEKELYALY KALVHWRHYL LGRFFYLRTD
HQTLKWIKTH LVLSNALEQW IEVIDQYDFK RDYAKGEYNK VADALSRRAD YLGALITEFG
LS
//
