ID A0A388KE82_CHABU Unreviewed; 554 AA.
AC A0A388KE82;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=Reverse transcriptase domain-containing protein {ECO:0000259|PROSITE:PS50878};
GN ORFNames=CBR_g2903 {ECO:0000313|EMBL:GBG68359.1};
OS Chara braunii (Braun's stonewort).
OC Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales; Characeae;
OC Chara.
OX NCBI_TaxID=69332 {ECO:0000313|EMBL:GBG68359.1, ECO:0000313|Proteomes:UP000265515};
RN [1] {ECO:0000313|EMBL:GBG68359.1, ECO:0000313|Proteomes:UP000265515}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S276 {ECO:0000313|EMBL:GBG68359.1,
RC ECO:0000313|Proteomes:UP000265515};
RX PubMed=30007417; DOI=10.1016/j.cell.2018.06.033;
RA Nishiyama T., Sakayama H., Vries J.D., Buschmann H., Saint-Marcoux D.,
RA Ullrich K.K., Haas F.B., Vanderstraeten L., Becker D., Lang D.,
RA Vosolsobe S., Rombauts S., Wilhelmsson P.K.I., Janitza P., Kern R.,
RA Heyl A., Rumpler F., Villalobos L.I.A.C., Clay J.M., Skokan R., Toyoda A.,
RA Suzuki Y., Kagoshima H., Schijlen E., Tajeshwar N., Catarino B.,
RA Hetherington A.J., Saltykova A., Bonnot C., Breuninger H., Symeonidi A.,
RA Radhakrishnan G.V., Van Nieuwerburgh F., Deforce D., Chang C., Karol K.G.,
RA Hedrich R., Ulvskov P., Glockner G., Delwiche C.F., Petrasek J.,
RA Van de Peer Y., Friml J., Beilby M., Dolan L., Kohara Y., Sugano S.,
RA Fujiyama A., Delaux P.-M., Quint M., TheiBen G., Hagemann M., Harholt J.,
RA Dunand C., Zachgo S., Langdale J., Maumus F., Straeten D.V.D., Gould S.B.,
RA Rensing S.A.;
RT "The Chara Genome: Secondary Complexity and Implications for Plant
RT Terrestrialization.";
RL Cell 174:448-464(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GBG68359.1}.
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DR EMBL; BFEA01000099; GBG68359.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A388KE82; -.
DR EnsemblPlants; GBG68359; GBG68359; CBR_g2903.
DR Gramene; GBG68359; GBG68359; CBR_g2903.
DR Proteomes; UP000265515; Unassembled WGS sequence.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041373; RT_RNaseH.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR24559:SF437; RIBONUCLEASE H; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF17917; RT_RNaseH; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00078; RVT_1; 2.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 2.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000265515}.
FT DOMAIN 40..263
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT REGION 377..420
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 384..399
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 554 AA; 63842 MW; 4FEDF6A6AD77C236 CRC64;
MRDVEHSIQL VPEYRVHHQA PYRLSIPEAT ELKRQLEELL RLGFIKLSNS PWGAPVLFAR
KADGTLRLCI DYRGLNRYTV KNSYPMPRSD ELVDRLAGNR FFTKIDLCSG YHQIRVAATD
QPRTAFRSQF GHYEFTVMPF GLTIVYFQID SSLAHFGIRV AAADQPKTAF RSRFGHYEFT
VMPFGLTNAP TTFQRAMNDI FRDILEQYVL VYLDEFLVYS RTLEKHLRHL RDVLDRLRRH
GFYANLSKCC FAQHKVDFLG HYVSDQGLQM DDVKITAIAE WPAPTSAKQL RSFLGLISYY
SNFIRGYARY SYVLTSTLLR KNPPWAWTPL HEDAFRALKK AVTCAPVLHL PDFDRPFILT
TDASDFVVGA VLSQVFPSSP DSSHPRIPRF PPPTPTTASR LTPTRPATDE PSIDYSPTIA
EDDTVKSRSG DCLIAFYSRQ LLLAEINYTA DEREVLAVVY AARHWRHYLH GAPFTVRTDN
SVVQAFLTKP KLTPRQTRWW RDLSEFSYRG RHRQLHRLHH DQLCLLQTSP LSYHSTLYST
LFVSHDGLPL AGFL
//
