ID A0A388LE97_CHABU Unreviewed; 1253 AA.
AC A0A388LE97;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994};
GN ORFNames=CBR_g31089 {ECO:0000313|EMBL:GBG80629.1};
OS Chara braunii (Braun's stonewort).
OC Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales; Characeae;
OC Chara.
OX NCBI_TaxID=69332 {ECO:0000313|EMBL:GBG80629.1, ECO:0000313|Proteomes:UP000265515};
RN [1] {ECO:0000313|EMBL:GBG80629.1, ECO:0000313|Proteomes:UP000265515}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S276 {ECO:0000313|EMBL:GBG80629.1,
RC ECO:0000313|Proteomes:UP000265515};
RX PubMed=30007417; DOI=10.1016/j.cell.2018.06.033;
RA Nishiyama T., Sakayama H., Vries J.D., Buschmann H., Saint-Marcoux D.,
RA Ullrich K.K., Haas F.B., Vanderstraeten L., Becker D., Lang D.,
RA Vosolsobe S., Rombauts S., Wilhelmsson P.K.I., Janitza P., Kern R.,
RA Heyl A., Rumpler F., Villalobos L.I.A.C., Clay J.M., Skokan R., Toyoda A.,
RA Suzuki Y., Kagoshima H., Schijlen E., Tajeshwar N., Catarino B.,
RA Hetherington A.J., Saltykova A., Bonnot C., Breuninger H., Symeonidi A.,
RA Radhakrishnan G.V., Van Nieuwerburgh F., Deforce D., Chang C., Karol K.G.,
RA Hedrich R., Ulvskov P., Glockner G., Delwiche C.F., Petrasek J.,
RA Van de Peer Y., Friml J., Beilby M., Dolan L., Kohara Y., Sugano S.,
RA Fujiyama A., Delaux P.-M., Quint M., TheiBen G., Hagemann M., Harholt J.,
RA Dunand C., Zachgo S., Langdale J., Maumus F., Straeten D.V.D., Gould S.B.,
RA Rensing S.A.;
RT "The Chara Genome: Secondary Complexity and Implications for Plant
RT Terrestrialization.";
RL Cell 174:448-464(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GBG80629.1}.
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DR EMBL; BFEA01000352; GBG80629.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A388LE97; -.
DR EnsemblPlants; GBG80629; GBG80629; CBR_g31089.
DR Gramene; GBG80629; GBG80629; CBR_g31089.
DR Proteomes; UP000265515; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041373; RT_RNaseH.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF17917; RT_RNaseH; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000265515}.
FT DOMAIN 863..1025
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 388..469
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1225..1253
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 40..67
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 412..426
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 449..463
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1253 AA; 140453 MW; 8C589A4F043C4C07 CRC64;
MTILTRSQTA AMDQKAGETD EAYEARLTAL IAEGKQRADV AAAARKKKEA EAEKQRLLAE
EQRQKHAAAA AKAADEERVR RREIIFREES ALHAQAKDWQ KEAGNGDPVD VGSRVSQLLN
RVTDLLATCI AQQEDIYSLD HTNKALQQSL DQTLKHVQQL EQWVANANAS AGPSDLADRV
NVLEIDVGTL KAGAQQHVCA AASSSTAPRE TIVKFDGLPI FCDASKTDPI QWWCQFELKL
DLHHVANENR HAYFYSRSGG ACQAWLDNML SAHACTVTEL HKYITWADLT AAWKKRFQVE
PPEHKAMDKL LTFSQNSMPS GDWISEFQRL ASTPKLPLNF DGIKLYFIKR SCPALQNALT
HVADSLTTSE ELFNKAAQII VTNLAARNTS PSSNDGQGAH QHRPKVAVVA AATTSDPSTS
SEAVSSDEGD RLAAAQNGGR PAEGRGRGKP KTNTNTSRPG QAAPAQGPWT AYGLTERGYR
FMLVYLDDIL VYSRTLEEHL DHLRRVLETL RCAKFKANRD KCEFVRQELE YLGHFVTPQG
ISPLSDKIQA VQDWSEPRNV TDVRSFLGLA GYYQRFIKGY SKIATHLTKL QCEDRPFDFG
TDAQESFLAL QASLLSAVVL RIYDPLLPTR VTTDASGYGI GFVLEQHDGV DWHLVEYFSK
KVSAVHSIDD ARKEELLAFV HTLKRWRHFL LGRRQFRWVT DNNPLVFYKS QDTVNSTIAR
WMAFIDQFDF FPNHIPGKSN RFADALSRRP DHCTAVYSTF EIEDDLRDIA SSAAIKPTPS
FATSTRIVPL PIRRPRTIGS KRDTCFFIRG GIIFFVCRKI HICAPGFLAS STTPPPPDTL
ESIARLADYA NAFGGPVSSM TSRAIASHAK EAIAVDITGP FPKHKTGADG ILTVVDRLTK
FAMFLPCHYH AKAPELAEVL YTGWIRTKGY PKEIVCDRDT RFMSDFWLAL IQRWGSSLKP
SSARHPQTDG QTERAHHTAQ VLLRTLIRPD QKDWVERLPD VELAYNSSIH PAIGMSPFEF
EHGSPVNSQL DTTMPRTTES DDHLLFIRRM QELLVKAHDQ MSKTQQRMRQ QANRQRLPCP
FRAGDLVWVS AAEFSLEQDI SRKLLLKWMG PWPILAPAGD APEGPSFIIR VPEHLPVNPV
FHCSKLAPYT PAELADFPGR RSQDLPSMDG FQEIGNIISH RRHGNKPTEF LVHFAYCTHR
ADRWLTPAEL QATALDALAR YEQKLKGKPA PSAPRRTRVQ VPPSDRQLRP RPA
//
