ID A0A388LM65_CHABU Unreviewed; 643 AA.
AC A0A388LM65;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:GBG83408.1};
GN ORFNames=CBR_g37122 {ECO:0000313|EMBL:GBG83408.1};
OS Chara braunii (Braun's stonewort).
OC Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales; Characeae;
OC Chara.
OX NCBI_TaxID=69332 {ECO:0000313|EMBL:GBG83408.1, ECO:0000313|Proteomes:UP000265515};
RN [1] {ECO:0000313|EMBL:GBG83408.1, ECO:0000313|Proteomes:UP000265515}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S276 {ECO:0000313|EMBL:GBG83408.1,
RC ECO:0000313|Proteomes:UP000265515};
RX PubMed=30007417; DOI=10.1016/j.cell.2018.06.033;
RA Nishiyama T., Sakayama H., Vries J.D., Buschmann H., Saint-Marcoux D.,
RA Ullrich K.K., Haas F.B., Vanderstraeten L., Becker D., Lang D.,
RA Vosolsobe S., Rombauts S., Wilhelmsson P.K.I., Janitza P., Kern R.,
RA Heyl A., Rumpler F., Villalobos L.I.A.C., Clay J.M., Skokan R., Toyoda A.,
RA Suzuki Y., Kagoshima H., Schijlen E., Tajeshwar N., Catarino B.,
RA Hetherington A.J., Saltykova A., Bonnot C., Breuninger H., Symeonidi A.,
RA Radhakrishnan G.V., Van Nieuwerburgh F., Deforce D., Chang C., Karol K.G.,
RA Hedrich R., Ulvskov P., Glockner G., Delwiche C.F., Petrasek J.,
RA Van de Peer Y., Friml J., Beilby M., Dolan L., Kohara Y., Sugano S.,
RA Fujiyama A., Delaux P.-M., Quint M., TheiBen G., Hagemann M., Harholt J.,
RA Dunand C., Zachgo S., Langdale J., Maumus F., Straeten D.V.D., Gould S.B.,
RA Rensing S.A.;
RT "The Chara Genome: Secondary Complexity and Implications for Plant
RT Terrestrialization.";
RL Cell 174:448-464(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GBG83408.1}.
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DR EMBL; BFEA01000438; GBG83408.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A388LM65; -.
DR STRING; 69332.A0A388LM65; -.
DR EnsemblPlants; GBG83408; GBG83408; CBR_g37122.
DR Gramene; GBG83408; GBG83408; CBR_g37122.
DR Proteomes; UP000265515; Unassembled WGS sequence.
DR GO; GO:0000045; P:autophagosome assembly; IEA:InterPro.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR024977; Apc4-like_WD40_dom.
DR InterPro; IPR045160; ATG16.
DR InterPro; IPR013923; Autophagy-rel_prot_16_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19878; AUTOPHAGY PROTEIN 16-LIKE; 1.
DR PANTHER; PTHR19878:SF8; AUTOPHAGY-RELATED 16, ISOFORM F; 1.
DR Pfam; PF12894; ANAPC4_WD40; 1.
DR Pfam; PF08614; ATG16; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 4.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000265515};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 199..387
FT /note="Autophagy-related protein 16"
FT /evidence="ECO:0000259|Pfam:PF08614"
FT DOMAIN 484..534
FT /note="Anaphase-promoting complex subunit 4-like WD40"
FT /evidence="ECO:0000259|Pfam:PF12894"
FT REPEAT 490..522
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 523..564
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 582..610
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 611..643
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT COILED 263..406
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 643 AA; 70208 MW; AAD05BF6A94B5AD7 CRC64;
MLSVKVLVGS LIFSKAPFTA ARSYLRGLRS LTSFCTSDTN FSTLPSSSAA FCPAPLVPAC
VFGTCAFSAC FVLDNSTLSA LSMIDLSSDA VTGSFAFCSS GATSDLFVLP SFLSGCNDFL
SAGFMTCIWL CLLLLSFALP WVPSLSLSSD ERLVDDVCFR QRGEANCATL LLPKDLRQKM
ATAMKGGFAI TAAKVQVLLR NRDEVDAFQE LVEGYGLYLG LATEAADRVC VLEKKLVQVQ
DDRDTVAAVL QRTERTIQRS PDIDALEAKV AALQQDLGQS YKASAEVSQQ LVQASSLAQS
LREELEEKKK VVVNLQESRA VADAKVDYLE GALKEKTNAV ELASMEAEAA VRERIEVEEK
LRIAEAENRS FVDKLMEFKL KEAEKINELN AMYEDMVKQF QRTQLQVGVG VWVCMRLCAS
ACDASLPVRK CRSVWVFGCA CGCVRARAML LCLFANAVKA PICTFQIRNP EEAKRGYGIQ
TILTHSNCNA LCLTPDGAMI CTGHTDGHLR FWEMKNGVLV NEVPAHSRAI TSVSVSQGGT
SILTNGRDNV LNVFDLRTFE ARCTLRAPGY LAPSNWSRAC MSPDDKYIAA GSSDSNVYVW
SHTTASLERV LRGHASPVFS CAWCDLGRPL VSCDKNGFLL VWE
//
