ID A0A388M1Y5_CHABU Unreviewed; 669 AA.
AC A0A388M1Y5;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 22-FEB-2023, entry version 12.
DE RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};
GN ORFNames=CBR_g48043 {ECO:0000313|EMBL:GBG88574.1};
OS Chara braunii (Braun's stonewort).
OC Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales; Characeae;
OC Chara.
OX NCBI_TaxID=69332 {ECO:0000313|EMBL:GBG88574.1, ECO:0000313|Proteomes:UP000265515};
RN [1] {ECO:0000313|EMBL:GBG88574.1, ECO:0000313|Proteomes:UP000265515}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S276 {ECO:0000313|EMBL:GBG88574.1,
RC ECO:0000313|Proteomes:UP000265515};
RX PubMed=30007417; DOI=10.1016/j.cell.2018.06.033;
RA Nishiyama T., Sakayama H., Vries J.D., Buschmann H., Saint-Marcoux D.,
RA Ullrich K.K., Haas F.B., Vanderstraeten L., Becker D., Lang D.,
RA Vosolsobe S., Rombauts S., Wilhelmsson P.K.I., Janitza P., Kern R.,
RA Heyl A., Rumpler F., Villalobos L.I.A.C., Clay J.M., Skokan R., Toyoda A.,
RA Suzuki Y., Kagoshima H., Schijlen E., Tajeshwar N., Catarino B.,
RA Hetherington A.J., Saltykova A., Bonnot C., Breuninger H., Symeonidi A.,
RA Radhakrishnan G.V., Van Nieuwerburgh F., Deforce D., Chang C., Karol K.G.,
RA Hedrich R., Ulvskov P., Glockner G., Delwiche C.F., Petrasek J.,
RA Van de Peer Y., Friml J., Beilby M., Dolan L., Kohara Y., Sugano S.,
RA Fujiyama A., Delaux P.-M., Quint M., TheiBen G., Hagemann M., Harholt J.,
RA Dunand C., Zachgo S., Langdale J., Maumus F., Straeten D.V.D., Gould S.B.,
RA Rensing S.A.;
RT "The Chara Genome: Secondary Complexity and Implications for Plant
RT Terrestrialization.";
RL Cell 174:448-464(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GBG88574.1}.
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DR EMBL; BFEA01000681; GBG88574.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A388M1Y5; -.
DR EnsemblPlants; GBG88574; GBG88574; CBR_g48043.
DR Gramene; GBG88574; GBG88574; CBR_g48043.
DR Proteomes; UP000265515; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000265515};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 169..185
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 79..111
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 330..353
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 504..669
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 89..107
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 524..539
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 669 AA; 72980 MW; 833833813A655509 CRC64;
MVRTDFIRGL SDSHLRKKIR KKCNPIEHTL TELIQYAIKY GKENNDVGLD SESDEDDPLG
VRRNSYSATA RMFTDRFGLG PAKKGVDRKA SSSASTSRRS SQAQGGRGEE EVSIKEVAAQ
LVTVVVPLTE FVQALQRQRL AAAQRQQAAM AAGAPMIRPT VARAVPPLRC YNCNQPGHLA
KDCPKPRTQG GPAGPSQIPL AAPTIAGQGT VATVMDTGAT EMVTPAATEI GPDEYMAAAM
FEPGTIGVIR QVQRITEESD LGSWRPGFED LAAPSPEYKD GHIDVLDALK ALDLRIPIPI
LYLLTISEAA NEKLIERCLK NRRRFEESRK GKKPVLQDLP ANEESQPLTS KLTEGPYPMH
EFAEYLVELT DVEPLPFADE DAWELHRVLN KSVALGMFQF FVDHEDHCIG EHFVVYYVIT
RPKPAEKEGT MALYPFAQLQ TIDPGLLELL ELIHLELLSI AQVIASEEEE IQPRLRTATA
PRRMYNAVVI PDYIAQRAER LEDFPEEKPL RPPSSYLRSA PPKAPKKTPK RKRRHPSPRT
QGSRIGGGEE VIQPARTRNP DPVPGSAATP LKETVVPSPP FPRVPDLNLD GAGSSSAAAA
GGGSRMGFPD PISRPPVLAG PLRSRQPPRG APVIDISSSS EPDGPSDRGG LHGGARHHQA
RGHRGGATP
//