ID A0A388MAP7_CHABU Unreviewed; 984 AA.
AC A0A388MAP7;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE RecName: Full=Reverse transcriptase domain-containing protein {ECO:0000259|Pfam:PF00078};
GN ORFNames=CBR_g52607 {ECO:0000313|EMBL:GBG91573.1};
OS Chara braunii (Braun's stonewort).
OC Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales; Characeae;
OC Chara.
OX NCBI_TaxID=69332 {ECO:0000313|EMBL:GBG91573.1, ECO:0000313|Proteomes:UP000265515};
RN [1] {ECO:0000313|EMBL:GBG91573.1, ECO:0000313|Proteomes:UP000265515}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S276 {ECO:0000313|EMBL:GBG91573.1,
RC ECO:0000313|Proteomes:UP000265515};
RX PubMed=30007417; DOI=10.1016/j.cell.2018.06.033;
RA Nishiyama T., Sakayama H., Vries J.D., Buschmann H., Saint-Marcoux D.,
RA Ullrich K.K., Haas F.B., Vanderstraeten L., Becker D., Lang D.,
RA Vosolsobe S., Rombauts S., Wilhelmsson P.K.I., Janitza P., Kern R.,
RA Heyl A., Rumpler F., Villalobos L.I.A.C., Clay J.M., Skokan R., Toyoda A.,
RA Suzuki Y., Kagoshima H., Schijlen E., Tajeshwar N., Catarino B.,
RA Hetherington A.J., Saltykova A., Bonnot C., Breuninger H., Symeonidi A.,
RA Radhakrishnan G.V., Van Nieuwerburgh F., Deforce D., Chang C., Karol K.G.,
RA Hedrich R., Ulvskov P., Glockner G., Delwiche C.F., Petrasek J.,
RA Van de Peer Y., Friml J., Beilby M., Dolan L., Kohara Y., Sugano S.,
RA Fujiyama A., Delaux P.-M., Quint M., TheiBen G., Hagemann M., Harholt J.,
RA Dunand C., Zachgo S., Langdale J., Maumus F., Straeten D.V.D., Gould S.B.,
RA Rensing S.A.;
RT "The Chara Genome: Secondary Complexity and Implications for Plant
RT Terrestrialization.";
RL Cell 174:448-464(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GBG91573.1}.
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DR EMBL; BFEA01000920; GBG91573.1; -; Genomic_DNA.
DR EnsemblPlants; GBG91573; GBG91573; CBR_g52607.
DR Gramene; GBG91573; GBG91573; CBR_g52607.
DR Proteomes; UP000265515; Unassembled WGS sequence.
DR GO; GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:InterPro.
DR CDD; cd00303; retropepsin_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 3.30.70.270; -; 3.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR InterPro; IPR001969; Aspartic_peptidase_AS.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR24559:SF437; RIBONUCLEASE H; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF08284; RVP_2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS00141; ASP_PROTEASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000265515}.
FT DOMAIN 777..854
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|Pfam:PF00078"
FT REGION 432..461
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 984 AA; 110775 MW; FAA35D21084044F6 CRC64;
MERKISEWVA NLSLGEEEEA ESYVSEDERA ALASELAAMT DPMERREREG EQKLAWKLKM
KREKKRRRQE VNRMTADIAK VQECRQEVLA QPDDKAKWDK VLGYLEVLSK AWMEERQASW
SQDVALSAMR SGFREFGRDI VTHIGGEVKH LRDNVGKFCE GTIEGAKAIA VVEGEARQRK
DPVKLKFPDA YGGKKEENFD NWEASVNSYI YLQHILIDEQ VLVAFQALKD EAASSARSLA
RAAGCENNLV AYSKVTPLSQ FLKLLKERFV DPTRGIRASD KLQTIHSQQW RSGRAFKGTM
DDLVAIPDHG VTETQWVQLF YRAMPEALRG HFFDKTEQAG ITYDALSKKV VLYESKSTPV
TTFSHKNLDK GKRWKGRTIS GQVRAKDHMI LTLEEGGIDE VPYNQIEWGL EEEDSSVGQG
RSYAAVAAGG KLQGRGEGQG QRGQAMGGRG PGAQGVGSQG NRQAAEVAGP CLDSCPETAC
VSVPLGTSLT SVAEELKERM PAWAKMKKES KGQLILVDVE VFRSRIGALI DSGATRSYIS
RREMKKLRLG LKVQKLIDPI VSVLADNRTM RVEDYVEGVQ AYFRLEQNGK VEKVLHSLTL
LVQDDLPFDV VLGMDWGEAA GATLQXREHE CRLPSPSGEA KTARLFHVSG VDNXLAHCCL
SAPXFARLVK KXQLEEQVFV VYVRPVTEAQ EKDSSTDPTI AKLLEEFKDL TESPTGVVSR
PIQHRIEIEP GSRTPKGAVY RMSPRELKEI CKQLDELLEK GWIRPSSSPF GAPVLFVPKK
EGELRMCIDY RGLNAITVKN VEPLPRIDDL LDRVQGCKYF SKIDLKSGYH QIEVHPDDQY
KTAFRTRYGH YEFTVLEKLR EANFKINAKK CEWAKTQLLY LGHVLDGDGI KPEDSKIAAI
RDWPTPRTLT ELWSFLGLAN YYRKFVRNFS TIAAPLRKLL KKEAIWQWDK DCTSALKRLK
SLIEYPVLKV ADPSLPFVVT TDAS
//
