ID A0A392MM18_9FABA Unreviewed; 458 AA.
AC A0A392MM18;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE SubName: Full=Gag-pol polyprotein {ECO:0000313|EMBL:MCH88019.1};
DE Flags: Fragment;
GN ORFNames=A2U01_0008900 {ECO:0000313|EMBL:MCH88019.1};
OS Trifolium medium.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=97028 {ECO:0000313|EMBL:MCH88019.1, ECO:0000313|Proteomes:UP000265520};
RN [1] {ECO:0000313|EMBL:MCH88019.1, ECO:0000313|Proteomes:UP000265520}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 10/8 {ECO:0000313|Proteomes:UP000265520};
RC TISSUE=Leaf {ECO:0000313|EMBL:MCH88019.1};
RX PubMed=29922311; DOI=10.3389/fpls.2018.00724;
RA Dluhosova J., Istvanek J., Nedelnik J., Repkova J.;
RT "Red Clover (Trifolium pratense) and Zigzag Clover (T. medium) - A Picture
RT of Genomic Similarities and Differences.";
RL Front. Plant Sci. 9:724-724(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:MCH88019.1}.
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DR EMBL; LXQA010013343; MCH88019.1; -; Genomic_DNA.
DR Proteomes; UP000265520; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR041373; RT_RNaseH.
DR PANTHER; PTHR46387:SF8; OS08G0481175 PROTEIN; 1.
DR PANTHER; PTHR46387; POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN; 1.
DR Pfam; PF17917; RT_RNaseH; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000265520}.
FT DOMAIN 213..342
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
FT NON_TER 458
FT /evidence="ECO:0000313|EMBL:MCH88019.1"
SQ SEQUENCE 458 AA; 51514 MW; FC1823F2288B0AA6 CRC64;
MIIKSHEETD HAAYLRKVFE QARQCKMRFN PEKCTFGVRA GKFLGFYLTE RGIEANPNKY
KTFVELPTPD DKKIHPNPQR NAHLVIPICS KTLQHLKKAL SEPPVLSRPN DEEVLYLYLA
VAAEAVSAAL IRETTEGQKP VYFTSKALQG XXLRYQLIEK IALALVYAAR RLRHYFLAHT
IVVRTDQPVK SLLGRPDMAG RMLKWSLELS EFDIHKWKIF VDGASSPTGA GAGIILENEN
GILIEVSLAL SFKTSNNQAE YEAFLAGLRL AVDMGVKEIK IYTDSQLVAS QVLGEYQAKN
DNLSEYLALV KDKITKFNSA EVQHVPRGHN TRADILSKLA STKKRGGNKS VIQEVLSRPS
IQKSSRILDI NVIGDANCWM TPVYNYLANG TLPSNQKEAA VVRRRACSYV ILDRNLYIRG
FSIPLLKCVE EDKVDYILRE IHEGINSQHL GGRSLARK
//
