ID A0A396M1A4_9BACT Unreviewed; 435 AA.
AC A0A396M1A4;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Sigma-54-dependent Fis family transcriptional regulator {ECO:0000313|EMBL:RHR62362.1};
GN ORFNames=DWW79_08485 {ECO:0000313|EMBL:RHR62362.1};
OS Alistipes sp. AF17-16.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae;
OC Alistipes.
OX NCBI_TaxID=2292190 {ECO:0000313|EMBL:RHR62362.1, ECO:0000313|Proteomes:UP000265869};
RN [1] {ECO:0000313|EMBL:RHR62362.1, ECO:0000313|Proteomes:UP000265869}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF17-16 {ECO:0000313|EMBL:RHR62362.1,
RC ECO:0000313|Proteomes:UP000265869};
RA Zou Y., Xue W., Luo G.;
RT "A genome reference for cultivated species of the human gut microbiota.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RHR62362.1}.
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DR EMBL; QUGX01000005; RHR62362.1; -; Genomic_DNA.
DR RefSeq; WP_008019868.1; NZ_QUGX01000005.1.
DR AlphaFoldDB; A0A396M1A4; -.
DR GeneID; 78581385; -.
DR Proteomes; UP000265869; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0000160; P:phosphorelay signal transduction system; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00156; REC; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011006; CheY-like_superfamily.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071:SF122; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YPLP-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00072; Response_reg; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00448; REC; 1.
DR SUPFAM; SSF52172; CheY-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50110; RESPONSE_REGULATORY; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Phosphoprotein {ECO:0000256|PROSITE-ProRule:PRU00169};
KW Reference proteome {ECO:0000313|Proteomes:UP000265869};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..117
FT /note="Response regulatory"
FT /evidence="ECO:0000259|PROSITE:PS50110"
FT DOMAIN 131..360
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT MOD_RES 52
FT /note="4-aspartylphosphate"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00169"
SQ SEQUENCE 435 AA; 49198 MW; 0405E18F9927E3DE CRC64;
MKVFVIEDNP VYNDYVCNLL KKDSFDTMSA YNLATAKKLL AKSEVDDIVV ADLRLPDGES
IELLRWMRAN DKQQVFIVMT NYGEVHTAVE SMKLGSKDYI QKQLLEDKLI PLIRTLQKEH
EKRLQWNIPI FVRQGEAYQK IKKRVRLVAT TRMSVLILGE NGTGKEHIAQ HIHQQSKLAD
KPFVAVDCGA LSPSLIQSAF FGHVKGAFTG AEANKTGYFL EADGGTLFLD EVGNLTMEMQ
QMLLRAIQER RYRPVGAKED KTANVRIVAA TNEDLQKAVT EKRFRQDLLY RLQEYVITMP
PLRDCPEDIM PLAEFFREMA NRELEREVKG FAASARNALL AHAWPGNVRE LKQKIQTAVL
QSEGDMITEA DLELDNEPSA TSACFTLKSG DEERGRILRA LKQAAGNKKM AAKILGIGRT
TLYNKLVEYG LNEEN
//
