ID A0A397L3M6_BRACM Unreviewed; 240 AA.
AC A0A397L3M6; M4DMA6;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=MADS-box transcription factor 23-like {ECO:0008006|Google:ProtNLM};
GN ORFNames=BRAA03T15351Z {ECO:0000313|EMBL:VDC84133.1},
GN BRAPAZ1V2_A03P64390.2 {ECO:0000313|EMBL:CAG7885096.1}, BRARA_K00360
GN {ECO:0000313|EMBL:RIA05387.1};
OS Brassica campestris (Field mustard).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3711 {ECO:0000313|EMBL:RIA05387.1};
RN [1] {ECO:0000313|EMBL:RIA05387.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Bowman J., Kohchi T., Yamato K., Jenkins J., Shu S., Ishizaki K.,
RA Yamaoka S., Nishihama R., Nakamura Y., Berger F., Adam C., Aki S.,
RA Althoff F., Araki T., Arteaga-Vazquez M., Balasubrmanian S., Bauer D.,
RA Boehm C., Briginshaw L., Caballero-Perez J., Catarino B., Chen F.,
RA Chiyoda S., Chovatia M., Davies K., Delmans M., Demura T., Dierschke T.,
RA Dolan L., Dorantes-Acosta A., Eklund D., Florent S., Flores-Sandoval E.,
RA Fujiyama A., Fukuzawa H., Galik B., Grimanelli D., Grimwood J.,
RA Grossniklaus U., Hamada T., Haseloff J., Hetherington A., Higo A.,
RA Hirakawa Y., Hundley H., Ikeda Y., Inoue K., Inoue S., Ishida S., Jia Q.,
RA Kakita M., Kanazawa T., Kawai Y., Kawashima T., Kennedy M., Kinose K.,
RA Kinoshita T., Kohara Y., Koide E., Komatsu K., Kopischke S., Kubo M.,
RA Kyozuka J., Lagercrantz U., Lin S., Lindquist E., Lipzen A., Lu C.,
RA Luna E., Martienssen R., Minamino N., Mizutani M., Mizutani M.,
RA Mochizuki N., Monte I., Mosher R., Nagasaki H., Nakagami H., Naramoto S.,
RA Nishitani K., Ohtani M., Okamoto T., Okumura M., Phillips J., Pollak B.,
RA Reinders A., Roevekamp M., Sano R., Sawa S., Schmid M., Shirakawa M.,
RA Solano R., Spunde A., Suetsugu N., Sugano S., Sugiyama A., Sun R.,
RA Suzuki Y., Takenaka M., Takezawa D., Tomogane H., Tsuzuki M., Ueda T.,
RA Umeda M., Ward J., Watanabe Y., Yazaki K., Yokoyama R., Yoshitake Y.,
RA Yotsui I., Zachgo S., Schmutz J.;
RT "WGS assembly of Brassica rapa FPsc.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CAG7885096.1, ECO:0000313|Proteomes:UP000694005}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG Genoscope - CEA;
RA William W.;
RL Submitted (JUL-2021) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Bra017638.1-P}
RP IDENTIFICATION.
RC STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra017638.1-P};
RG EnsemblPlants;
RL Submitted (MAR-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; LS974619; CAG7885096.1; -; Genomic_DNA.
DR EMBL; KZ864166; RIA05387.1; -; Genomic_DNA.
DR EMBL; LR031572; VDC84133.1; -; Genomic_DNA.
DR RefSeq; XP_009138271.1; XM_009140023.2.
DR SMR; A0A397L3M6; -.
DR STRING; 51351.M4DMA6; -.
DR EnsemblPlants; Bra017638.1; Bra017638.1-P; Bra017638.
DR GeneID; 103862329; -.
DR Gramene; Bra017638.1; Bra017638.1-P; Bra017638.
DR KEGG; brp:103862329; -.
DR eggNOG; KOG0014; Eukaryota.
DR HOGENOM; CLU_053053_2_0_1; -.
DR OMA; CFSDGDT; -.
DR OrthoDB; 448566at2759; -.
DR Proteomes; UP000011750; Unassembled WGS sequence.
DR Proteomes; UP000264353; Unassembled WGS sequence.
DR Proteomes; UP000694005; Chromosome A03.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd00265; MADS_MEF2_like; 1.
DR Gene3D; 3.40.1810.10; Transcription factor, MADS-box; 1.
DR InterPro; IPR033896; MADS_MEF2-like.
DR InterPro; IPR002487; TF_Kbox.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR PANTHER; PTHR48019:SF230; AGAMOUS-LIKE MADS-BOX PROTEIN AGL16; 1.
DR PANTHER; PTHR48019; SERUM RESPONSE FACTOR HOMOLOG; 1.
DR Pfam; PF01486; K-box; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SRF-like; 1.
DR PROSITE; PS51297; K_BOX; 1.
DR PROSITE; PS00350; MADS_BOX_1; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000011750};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..61
FT /note="MADS-box"
FT /evidence="ECO:0000259|PROSITE:PS50066"
FT DOMAIN 86..176
FT /note="K-box"
FT /evidence="ECO:0000259|PROSITE:PS51297"
FT COILED 86..143
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 240 AA; 27506 MW; 7FB934AB3E51310B CRC64;
MGRGKIAIKR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVIIFSS TGRLYDFSSS
SMKSVIERYR DAKCDTNSEM NPASELKFWQ NEAAILKRQL HNLQENHRQM MGEELSGLSV
EDLQKLENQL EMSLRDVRMK KEQMLVEEIK ELNREGNLVH QENLELHKKV NLMHQQHMEL
HKKVSEVESV KSADKISLLT NGLDMGGNSS EHVHLQLSQP QQHDETSSKA IQLSYFSFIA
//
